| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1250 |
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| Symbol | |
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| ID | 8224821 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 1480419 |
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| End bp | 1481996 |
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| Gene Length | 1578 bp |
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| Protein Length | 525 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644929112 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_003085664 |
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| Protein GI | 255035043 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1174] ABC-type proline/glycine betaine transport systems, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.615651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.522042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGAGC AGCAAACCTT ATGGGCCTTT ATGGCGCAGC AATCGGGCAA GCTGTGGAGC
CAAACCCTGG CCCACATCGG CCTCACGTGC ATTTCGCTGC TCATCGCCAT TGCCATTGGC
TTACCGCTCG GCATCTGGAT CGCACGGCGG CAGAAGGCCG CCTGGCTGGT ACTCGGCGTG
GCGGGCATTC TGCAAACGAT CCCCAGCATT GCATTGCTCG GTTTTATGAT CCCGCTGCTG
GGCATAGGCG CATTGCCTGC GATTACGGCC TTGTTTTTGT ATGCATTACT GCCCATTATC
CGCAATACTT ACACGGGCAT TACGGGCGTC GACCCGGCCA TTACCGAATC GGCGCGGGGT
ATGGGCATGA GCGCCTGGCA GATACTGACG GGCGTGGAAC TGCCGCTGGC GATGCCAGTA
ATCCTGGCGG GTATCCGCAC GGCCACGGTC ATCAATGTAG GCGTGGCGAC GTTGGCGGCA
TACATCGCGG CGGGCGGCTT GGGCGAGTTT ATTTTCGGCG GCATTGCATT GAACAACACG
CAAATGATCC TCGCCGGGGC CATTCCGGCA GCATTGCTGG CCATTCTGCT GGACTTTTTG
TTGTCATTAC TTCAAAAGAT GCGCTTGAAG AAAATGCGCA AAGTGTCCGT CGTGCTGCCT
GTATTATTGC TGCTGCTTTC CTCTTTTTAC CTCATCCCCT ATACAAAAGG TAACCTGCTT
GCCGGCTTCA CGCCGGAATT TATGGGCCGC GAGGATGGTT ATCTAGGTTT GAAATCCAGA
TACGGCCTCG ATATCCCGAC GGTCGTGATC AGCGACGCGG TGATGTATAA GGCCGCATTT
GAACAAAAGC TCGACGTTAT CAGCGGGTAT AGCACCGATG GCCGGCTTAA AGCATTCGAC
CTGATGACGC TCGACGACGA TCAGCACATT TTTCCGCCTT ACTATGCGGC GCCGGTCGTG
CGGCAGGAGG TTTTAAGTCA ATACCCTGAA TTGCAGCCGG TTCTGGAACA ATTATCAGGC
TATATCAATG ACTCGGTCAT GACGGAGCTG AATTACCGGG TGGATTACCT GAAACAAGCG
CCGGAACGTG TGGCGCACGA TTTCCTGGTG TCCAAAGATC TTTACCAACC GCCGCGGAAC
GGCAACAAGG GGACAATTCG CCTCGGTTCC AAGATTTTTG CGGAGCAATA TATTTTAATA
CAAATGTACA AAGAGCTGAT CGAGGGGAAT ACCGAGCTCA AAGCGGCTAC GAAAACCGGC
CTGGGCGGCA CCAAAATCTG CTTCGACGCA TTGAGTAATG GCGAAATCGA TATGTACCCC
GAATACACCG GAACCGGCCT GCTGGCCATC CTGAAACCAG GCCGGGCGCA ACTGAAAAGC
CTTGGCGGCG ACCGGGAGGA GGTTTATGAG TATGTCAAAA ACGAATTTCT GGAACGGTAC
CGGCTGCAAT GGCTGCGGCC GATCGGCTTT AATAATGCCT ACGCGCTGAT GATGCGCCGC
GCGCAGGCAC AATCCTTGAA CATCCAATCC ATCACCGACC TAAAAAACTA TGCAACTAAT
GGAAACCACC GGCATTAG
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| Protein sequence | MEEQQTLWAF MAQQSGKLWS QTLAHIGLTC ISLLIAIAIG LPLGIWIARR QKAAWLVLGV
AGILQTIPSI ALLGFMIPLL GIGALPAITA LFLYALLPII RNTYTGITGV DPAITESARG
MGMSAWQILT GVELPLAMPV ILAGIRTATV INVGVATLAA YIAAGGLGEF IFGGIALNNT
QMILAGAIPA ALLAILLDFL LSLLQKMRLK KMRKVSVVLP VLLLLLSSFY LIPYTKGNLL
AGFTPEFMGR EDGYLGLKSR YGLDIPTVVI SDAVMYKAAF EQKLDVISGY STDGRLKAFD
LMTLDDDQHI FPPYYAAPVV RQEVLSQYPE LQPVLEQLSG YINDSVMTEL NYRVDYLKQA
PERVAHDFLV SKDLYQPPRN GNKGTIRLGS KIFAEQYILI QMYKELIEGN TELKAATKTG
LGGTKICFDA LSNGEIDMYP EYTGTGLLAI LKPGRAQLKS LGGDREEVYE YVKNEFLERY
RLQWLRPIGF NNAYALMMRR AQAQSLNIQS ITDLKNYATN GNHRH
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