Gene Dfer_1212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1212 
Symbol 
ID8224783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1439430 
End bp1440311 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content54% 
IMG OID644929074 
ProductMethenyltetrahydrofolate cyclohydrolase 
Protein accessionYP_003085626 
Protein GI255035005 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0190] 5,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.000340013 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000458774 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACTAC TCGACGGGAA AGCTATTTCT TCCCAAATAA AATCCGAAAT CAAGGCCGAG 
GTGGAACAAT GGGTCGCCGG AGGTGGCAAA AAGCCGCATT TGGCAGCTAT TCTTGTAGGC
CAGGACGGCG CGAGTGAAAC GTACGTCGCT TCCAAAATCC GCAGCTGTGA AGAAATCGGC
TTCACTTCTA CCCTGCTTCG GTTCGAGGCA GACATCACCG AGGCGCAGCT TCTCGAAGCC
GTCGAATCGC TGAACAACGA TCCCGACGTG GACGGTTTTA TTGTACAGCT TCCGCTGCCG
AAACACATTT CTGAAAACAC GGTGATGGAA GCCGTGAATC CCGCGAAAGA CGTGGACGGT
TTTCACCCGA TCAACGTGGG AAGAATGTGC AAAGGCCTGC CGGCCTACAT TTCCGCAACA
CCGTTCGGTA TACTCGAAAT GCTCATCCGC GCGGGCATCG AAACGAGCGG CAAGCATTGC
GTGGTAATTG GCCGGAGCCA GATTGTGGGC CTGCCGATGA GCATTCTCAT GCAGCGCAAC
ACCTTCCCCG GCAACTGCAC GGTGACAATC ACGCACAGCA AAACGCAAAA CCTGAAAGAG
ATCTGCCAGT CGGCCGACAT CCTGATCGTC GCATTGGGCC GTCCGGAATT CGTGAAAGCG
GATTACGTGA AGGAAGGCGC GGTGGTGGTG GACGTGGGCA TTACCCGCGT AGCCGACGCA
ACCAAGAAAA GCGGCTTCTC GATCAAAGGC GATGTCGATT TCAACGACGT AGCACCCAAA
GCCAGCTTTA TTACCCCGGT TCCGGGCGGC GTAGGGTTGA TGACCATCTG CGGGTTGCTA
ACTAATACTT TCAAGGCGGC TAAGAAGGAG ATTTATAAGT AG
 
Protein sequence
MQLLDGKAIS SQIKSEIKAE VEQWVAGGGK KPHLAAILVG QDGASETYVA SKIRSCEEIG 
FTSTLLRFEA DITEAQLLEA VESLNNDPDV DGFIVQLPLP KHISENTVME AVNPAKDVDG
FHPINVGRMC KGLPAYISAT PFGILEMLIR AGIETSGKHC VVIGRSQIVG LPMSILMQRN
TFPGNCTVTI THSKTQNLKE ICQSADILIV ALGRPEFVKA DYVKEGAVVV DVGITRVADA
TKKSGFSIKG DVDFNDVAPK ASFITPVPGG VGLMTICGLL TNTFKAAKKE IYK