| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_1197 |
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| Symbol | |
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| ID | 8224768 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1417621 |
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| End bp | 1418628 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644929059 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_003085611 |
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| Protein GI | 255034990 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00505676 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.236606 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCTA CGATCATACA TTCCGCCGAC ATCCTCGATT TCAACCCGAT GCCCAATCCG
CAGTCGGTCA ATCCCAAAGT CCGCGTTCAG AACACGGGCG AGTTCATGAC GCGTTTTCAT
CCGAAAGTGG GAGAGATGAA GTTCAAAAGT CTCCTTTTTC CGCATGTGCA CGTGATGAAC
CTGCACTGGA CATCGTACGA AGATGTAGAA CTGCACGACA GTTCGCAGGT GGACACCATC
AATATCAATT TTCACATGGC TGGCCGGCTC GATACCCAAT TCGAAGGTCT TTCGCACGAG
CTGAATATGC GGCCCGGACG GCATAACCTG GTGTTTTCAC CCGAGGGCGG CGATACCAAC
CGGGTTGCGG AGAACGAGTC GCTCGAAATG TTCCATATCA GTCTGGATAA GGCCTATTTT
TCCGACATTA TCGGGTGCGA CGACCATTGG AGCGAGCGCG TGCAGGAGCA TTTGTTTCGA
AACAGGCCGT TTTCAGGCAT TACTGGTACA GCGGGCATTA CTACGCAAAT GGCCGGTTTG
ATCAAGGAAG TGAAACAATG CGATCAGCAG GGGACGATGA GAAACCTGAT GGTCCAATCA
AAAATACTGG AACTGCTGGC TTTGCAGATC GACCAGTTCC GGGGCCCGGA ACGGCAGCCT
GCACCAGGTA TGCCGGCAAT GGACAGAGAC AGGCTGTATC AGCTGAAAAA TGTGCTCGAC
GCTCGTTTTC TGGAAGATTT CACGCTCGCG GAATTGTCGC GAATGTGCCT GCTGAATGAA
TTTAAAGTGA AAAAAGGATT CAAGGATCTG TTCGGGACGA CCGTTTTCGG CTACCTGAGA
AAGCTGCGGA TGGATTACGC CGAACGACTA CTTCGCGACT CTTCGCAATC GGTAGAAGAG
GTTTCCGACC TGCTGGGGTA TGAACATGCG CAGCACTTTT CGGTCGCGTT CAAAAAATAC
ATGGGCATTA ACCCGTCACA GGTTAGAATG GGGTTGAAAG TGGCATGA
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| Protein sequence | MAATIIHSAD ILDFNPMPNP QSVNPKVRVQ NTGEFMTRFH PKVGEMKFKS LLFPHVHVMN
LHWTSYEDVE LHDSSQVDTI NINFHMAGRL DTQFEGLSHE LNMRPGRHNL VFSPEGGDTN
RVAENESLEM FHISLDKAYF SDIIGCDDHW SERVQEHLFR NRPFSGITGT AGITTQMAGL
IKEVKQCDQQ GTMRNLMVQS KILELLALQI DQFRGPERQP APGMPAMDRD RLYQLKNVLD
ARFLEDFTLA ELSRMCLLNE FKVKKGFKDL FGTTVFGYLR KLRMDYAERL LRDSSQSVEE
VSDLLGYEHA QHFSVAFKKY MGINPSQVRM GLKVA
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