Gene Dfer_1140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_1140 
Symbol 
ID8224711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1358750 
End bp1359178 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content48% 
IMG OID644929002 
Producthypothetical protein 
Protein accessionYP_003085554 
Protein GI255034933 
COG category[S] Function unknown 
COG ID[COG5642] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02293] putative toxin-antitoxin system antitoxin component, TIGR02293 family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.272267 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0148221 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAT ACATGGTTAA CGAACGTTTG GGAGGTTACG GAATCCTCAA ACATGCTGTA 
AAAGATGATT TCGACCTGGC TTACCTGGCC GAAAACGGCG TTCCGAAAGC TTCTATCCAG
CATCTGGCTG ATTCGATCGG GATGGATATT AAAGATGTGA TTGCGCTGCT GCCGGTTACT
TCACGCAACT TACAGCGTTA CAATGACATC GATCTGCTCA GCAATGTAGT TTCTGATCAC
CTGATCGCCC TCGCTGATCT CTTCTCGGTA GGGAACAGGG CTTTGGGGAA AGAATATTTC
CTCGATTGGC TGAACAACGA GGTGCCTGCG CTGGGAAGTG AGAAACCTAT CAGCTTTTTG
CGGACCCATG CGGGTATTGA GCTGGTAAAA ACCGAATTGG GGCGCATGGA ACACGGTATT
TTCGCTTAA
 
Protein sequence
MTAYMVNERL GGYGILKHAV KDDFDLAYLA ENGVPKASIQ HLADSIGMDI KDVIALLPVT 
SRNLQRYNDI DLLSNVVSDH LIALADLFSV GNRALGKEYF LDWLNNEVPA LGSEKPISFL
RTHAGIELVK TELGRMEHGI FA