| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0988 |
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| Symbol | |
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| ID | 8224558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1151718 |
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| End bp | 1153565 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928849 |
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| Product | DNA mismatch repair protein MutS domain protein |
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| Protein accession | YP_003085402 |
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| Protein GI | 255034781 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0249] Mismatch repair ATPase (MutS family) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 0.928875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.94372 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGAGA CATTTAAAGA AAAGGCGCGG CAGTACAAAG TCATCGCGGA AAGCCTGGTA
CCCCAGCTCA ATAGCCTGTC ACTGGCCCGT CTGGGCGTTT TTCTGGCAAC GGGTATTTTG
ATACTATTCT TTGCCGCCAA TGGCTGGGTA ATTCCCGTGG TGGGAACGGC GGTAGCGGGC
GCTGTGCTGT TCATGGTGAT CCTGCGCAGA TATGACGAGC TTTCTGGTGC CAAGCGGAAG
GCGGAGCTTT TGAAGCAAAT CAATGAGGAC GAAATCCTGC GTGCGCAGCA CCAGCTGGCA
AGCTTCCCTA CCGGCGATGC TTTCCTGCAC CGCGACCAGG ACTACGCGGC CGATCTGGAC
ATTTTCGGGC ATCATTCGCT ATTTCAACTC CTCAACCGCA CCACCACCGA ATCGGCCGCG
CGGATGCTTG CGCACTGGCT CACATCCCCC GCCGACCGGC AAACCATCTC CGAACGTCAG
GCAGCAGTGC GCGAACTGGC ACCGCTCGCC GATTGGCGAC AGGCGTTCCA GGCAGCGGGA
ATGCCCTTCG AGACCACCAA AAGCAGTTAC AACCTGCTCC TGAAATGGAT TGAAGAACCG
CCGCAATTCC TACCCGCGCG GCAACGGCTG AAAACGACCA GCATTGCACT CGCCGCCGCG
GCCAGCCTGG CGCTGCTCTA TTTCCTGTTT TACTTCCTGT TCCATCTGCA AGAGCTTTCC
TTCATGCATT TGCTGCCGCT GGGTATCAGT GTGGCCGTCA ATTCGGTTTA CCTGCGCAAA
TTCAGGCCTG TGGCTGAGCA CATTATCCAA AGCACGCAGG CAAACATCGG CATTCTCGGT
GCATACCAGT CCCTTATCGG CGTTGCCTGG GCTGAAAGTT TTACGGGAAA AAAACTGAGG
GAAATACGCG CGGCGCTGTT CGAAAATGGC AAATCGGCTG CGTCGGATAT AGGTGCATTG
AAGAAAAACC TTGAAATTTT CCAGCAAAAG GGCACGCGCA ATACAATTGG CAAAAACGCA
TTTTACGGAA TGCTCAACAA TCTATGGCTG CTCGATGTGC ACCTCATACT GCGGACCGAA
GGTTGGAAAT CCAGGAACAG TGTGCGCATT CGTCCCTGGA TTGCGGCCAT CAGCGAGCTG
GAAGCGCTGG CCAGCCTCGC AGGCTTCGCC CACGCGAATC CCGGGTATCA GTACCCCGAA
ATTACGACTG AGCCCTATCT CATTGATTTC CGGTCGGTTG GCCATCCTTT GTTAAACCAT
TACAGGCGCG TCACCAACGA CTTCACGATG AGCGGCCGTG GTGCCACCAC GATGATCACC
GGCTCCAATA TGGCCGGCAA GAGTACGTTC CTGCGCACCA TCGGCATTAA CCTCGTGCTG
GCATTCGTGG GAGCGCCCTG CTGTGCGTCG CATGCCCGCG TTTCGCTCCT GCGCGTGTTT
ACGAGCATGC GCACGCAGGA CAATCTCGAA GAATCCGTTT CCTCGTTTTA TGCCGAGCTG
CGGCGCATCG AGCGGTTGCT GGAACTCGTG GGCCAGGGCG AACCGATCTT TTTCCTGCTC
GATGAAATGT TCAAAGGCAC CAATTCGCAG GACCGTTTCC GCGGCGGCGT GTCGCTGATC
CGCCAGCTGA GCGAACTCGA TGCATTCGGC ATCATTTCCA CGCACGATCT CGACCTGGCC
CGCTTAGCTA CCGACATCCG CAATTTCAGC TTCAACAGCA CTATCGAGGA CGGACAGATT
TCCTTCAACT ACCGGCTCAC ACCCGGTATT TGCACGGATT TCAATGCGAG TGAACTTATG
AGACGCAGCG GCATCCGCAT TCTGCCGGAT GTATTGCCGG CCAGCTGA
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| Protein sequence | MEETFKEKAR QYKVIAESLV PQLNSLSLAR LGVFLATGIL ILFFAANGWV IPVVGTAVAG
AVLFMVILRR YDELSGAKRK AELLKQINED EILRAQHQLA SFPTGDAFLH RDQDYAADLD
IFGHHSLFQL LNRTTTESAA RMLAHWLTSP ADRQTISERQ AAVRELAPLA DWRQAFQAAG
MPFETTKSSY NLLLKWIEEP PQFLPARQRL KTTSIALAAA ASLALLYFLF YFLFHLQELS
FMHLLPLGIS VAVNSVYLRK FRPVAEHIIQ STQANIGILG AYQSLIGVAW AESFTGKKLR
EIRAALFENG KSAASDIGAL KKNLEIFQQK GTRNTIGKNA FYGMLNNLWL LDVHLILRTE
GWKSRNSVRI RPWIAAISEL EALASLAGFA HANPGYQYPE ITTEPYLIDF RSVGHPLLNH
YRRVTNDFTM SGRGATTMIT GSNMAGKSTF LRTIGINLVL AFVGAPCCAS HARVSLLRVF
TSMRTQDNLE ESVSSFYAEL RRIERLLELV GQGEPIFFLL DEMFKGTNSQ DRFRGGVSLI
RQLSELDAFG IISTHDLDLA RLATDIRNFS FNSTIEDGQI SFNYRLTPGI CTDFNASELM
RRSGIRILPD VLPAS
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