Gene Dfer_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0977 
Symbol 
ID8224547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp1135586 
End bp1136194 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content55% 
IMG OID644928838 
Product2OG-Fe(II) oxygenase 
Protein accessionYP_003085391 
Protein GI255034770 
COG category[L] Replication, recombination and repair 
COG ID[COG3145] Alkylated DNA repair protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.177384 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.387362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAAT TAAGTCTTTT TGGGTCTGAA GAAACCCTGC TTTTTCCCGA AAACCTGCTC 
GAATATTATC CCGGCTTCGT GCCACCGGAC GAAAGTGCCG CGCTCATCGG GAAATGGATC 
ACGGAGGTTC CCTGGCGGCA GCAGGTCATG CAAATGTACG GCAAACAGGT AACTGCCCCC 
CGGCTCATGG CCTGGTATGG CGATACCGAA AAGTCGTACA CGTTTTCGGG CACCCGTTTT 
GAACCCTATG GCTGGACAAA GGAACTGGCC GCATTGAAAA AGCGCATTGA AGAGAAAACC 
GGTTTTACAT TCAACAGCGT GCTGCTGAAC TACTACCGCG ACGGCAACGA TTCCGTGGCC 
TGGCACGGCG ACAATGAGCA GGAGCTGGGC CGGAACCCTG TGATCGCTTC CGTAAGCCTG 
GGCCAGGAGC GTCGGTTCGA GTTCCGATAC CGGGCCGATC ATTCGCGGAA ATATGGCCTG 
CCGCTGGAAA ACGGCTCGCT GCTGATCATG AAGGGCGACT TGCAGCATAC CTGGGAGCAC 
CGCATTCCAA AATCGAAAAC GCAGAATGCC CCGAGGATCA ACCTCACTTT CAGGACCATT 
CAAAGGTAA
 
Protein sequence
MKQLSLFGSE ETLLFPENLL EYYPGFVPPD ESAALIGKWI TEVPWRQQVM QMYGKQVTAP 
RLMAWYGDTE KSYTFSGTRF EPYGWTKELA ALKKRIEEKT GFTFNSVLLN YYRDGNDSVA 
WHGDNEQELG RNPVIASVSL GQERRFEFRY RADHSRKYGL PLENGSLLIM KGDLQHTWEH 
RIPKSKTQNA PRINLTFRTI QR