| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0974 |
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| Symbol | |
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| ID | 8224543 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 1130365 |
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| End bp | 1131657 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644928834 |
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| Product | integrase family protein |
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| Protein accession | YP_003085388 |
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| Protein GI | 255034767 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.0711773 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.0223597 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGTTCA AACAAAATCT GTCATTGCTT TTCTGGCTGT ACCGGGGCAA GGCCTCCAAA
GACGGAAAAG CACCCATCTA TGTCAGGATT ACCATCGACG GAACCGACAC TGACATTTCC
CTTGGCAAAA AGATCCATCC CGACTTCTGG AACAGCGATG CCAAGCTGGT GACCGCTACG
ACAGCGGAAG CGAAGATCAT TAACTTGAAA ATCGTCCAGG CACAGGCTGA GATCGAAAAA
CACTTTCTCG TGCTGCAATC CCAGTTTAAC CATGTGACGC CGGTGATGCT GAAAAATGCC
TATCTGGGCT TGCCATTAAC TCATTCCAAA GCAAAGCCGG AAAAGGCTGC CGGACCCAGC
CAATCGCTGC TAGCAGCCTT CGATGAATTC ATCGCGATCT TCGAAAAGAA AGCTAAGAAA
GGAATTCGAT CAGAGGGGAC ATTAAGACAC TGGCGGTCGA CCAAACGGAA GGTCGAAGCA
TTTATCCGCT TCCGTTATCA GCGGAAGGAC ATTGAAATGA CCGAGATCGA CCAGTGCTTT
GCCGAAGAGT TCTACGACTA TTTGACACTC CACCTGGACG AGCCACTTTC TGAGGTCACT
GCCAAGAAGC TGGTGAAATG GACAAGGCAG ATCGTCAAAA CAGGCGTTAA GAAGAAGGTT
ATCCCTTCCA ATCCACTGGA AGGGTTTGTT TGCTCGGGCG GAAACAAGGA AGTCCTGCCG
TTGGAGCTAT TTGAAGTCGA GGCCATTCAT AAAAAGCAGA TCGACATCGA CCGGATCAGC
GAAGTGCGCG ACGCCTTCAT TTTCCAGTGC TTTACCGGCT TTGCCTATCA GGATATGTAT
AACCTCTCTC CGGAGAATAT TGTGAAAGTC GGCCGAGCTG GTGAAAAATG GCTGATCAAA
GACAGAGGTA AGACAGAGGT CACTGAAATG GTGCCCATTC TCCCGATCGT GCAGGATTTG
ATCGATAAAT ACCAAAGCCA TCCTTATTGC AGGGTTAACA ACCGGCTGAT CCCGGTCAAC
AGCAATTTCC GGTACAATGT TTATCTCAAA GAGCTTGCCG TGATCTGCGG GATCAAAAGG
CCGCTAAATA CGCACCTTGC CCGTCATACG TTCGCCGACA TGATGCTCAA CAATGGCGTG
CCCTTGGAAG ATGTCGGTAA AATGCTTGGA CATCGGAATA TTAGAACAAC CCAACGCTAC
GCTCGCGTCA GAAAACAAAG GATTAGCGCT AATGTAGCAA TCGCAAAACA GAAACTCTTC
ACAACGTCGG GCGAATTGCG ACCCATGAAT TGA
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| Protein sequence | MKFKQNLSLL FWLYRGKASK DGKAPIYVRI TIDGTDTDIS LGKKIHPDFW NSDAKLVTAT
TAEAKIINLK IVQAQAEIEK HFLVLQSQFN HVTPVMLKNA YLGLPLTHSK AKPEKAAGPS
QSLLAAFDEF IAIFEKKAKK GIRSEGTLRH WRSTKRKVEA FIRFRYQRKD IEMTEIDQCF
AEEFYDYLTL HLDEPLSEVT AKKLVKWTRQ IVKTGVKKKV IPSNPLEGFV CSGGNKEVLP
LELFEVEAIH KKQIDIDRIS EVRDAFIFQC FTGFAYQDMY NLSPENIVKV GRAGEKWLIK
DRGKTEVTEM VPILPIVQDL IDKYQSHPYC RVNNRLIPVN SNFRYNVYLK ELAVICGIKR
PLNTHLARHT FADMMLNNGV PLEDVGKMLG HRNIRTTQRY ARVRKQRISA NVAIAKQKLF
TTSGELRPMN
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