Gene Dfer_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0911 
Symbol 
ID8224480 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand+ 
Start bp1069072 
End bp1070172 
Gene Length1101 bp 
Protein Length366 aa 
Translation table11 
GC content52% 
IMG OID644928775 
Productarsenical-resistance protein 
Protein accessionYP_003085329 
Protein GI255034708 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0798] Arsenite efflux pump ACR3 and related permeases 
TIGRFAM ID[TIGR00832] arsenical-resistance protein 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.28145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.11905 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAAAA ACCAAAATTT TATGCAAGAA AAGCGGCTTT CCTTCCTTGA CCGGTATTTG 
ACCGTCTGGA TCTTCCTGGC CATGCTTTTG GGTACGTCCA TAGGGTATTT TTTCTCGGGC 
ACACCCGGTT TTATCAATCG GTTTAATGCT GGTTCGACGG CAGCGGCCGG CGCCGGTGCG 
CTGGGCGTGA ACGTGCCGCT GGCCATCGGG CTGATCCTGA TGATGTACCC GCCGCTTGCC 
AAAGTGCGCT ATTCGGAACT TGCTCAAATA TTCGGGAATA CGCGCATTCT GGGCCTGTCA 
CTGCTGCAAA ACTGGATCGT GGGGCCTATC CTGATGTTCG GTCTGGCGGT GATATTCTTG 
CCCGATAAAC CGGAATACAT GGCCGGATTG ATCATTATTG GAATTGCGCG CTGCATTGCG 
ATGGTGATCG TCTGGAATGA CCTTGCCGGC GGCGACCGGG TGTATGCGGC CGGGCTGGTC 
GCATTCAACA GCATATTTCA GGTGTTGTTT TATTCGGTAT ACGCTTATGT GTTCGTGACG 
GTGTTACCGC CATTGTTTGG TTTGAAAGGG TTTAATGTCA ATATCACCAT CGGAGAAGTT 
GCGCAAAGCG TCTTCATTTA CCTCGGCATC CCATTCCTGG CAGGAATCAT TTCGAGGGAA 
GTTTTGACGA GGCTATTCAG CAAGCATTGG TACGAGCAGA AGTTCCTTCC GGCGATCAGC 
CCGATTACGC TGATTGCCCT GCTATTTACC ATTGTGGTGA TGTTCAGCCT GAAAGGCCAG 
TTGATTGTGA CGATCCCCAT CGATGTGCTG CGCATTGCGA TCCCGCTCTC AGCCTATTTC 
GCGATCATGT TCTTTTCCGC CTTTTATCTT TCAAAACGGG CAGGCGCGGG CTACTCAAAG 
TCTACTTCAC TTGCATTTAC GGCCGCAGGC AACAATTTTG AGCTGGGTAT TGCTGTGGCT 
ATCGCCGTGT TCGGTGTTGG TTCGGGCGCG GCATTTGCCG CAGTGATCGG CCCGCTGATC 
GAAGTGCCGG TATTGATCCT GATGGTGAGA TATGCCAAGA GCCAGCGGCA ATCATTTGCG 
GCTCTGAACA GAAATGTTTA G
 
Protein sequence
MIKNQNFMQE KRLSFLDRYL TVWIFLAMLL GTSIGYFFSG TPGFINRFNA GSTAAAGAGA 
LGVNVPLAIG LILMMYPPLA KVRYSELAQI FGNTRILGLS LLQNWIVGPI LMFGLAVIFL 
PDKPEYMAGL IIIGIARCIA MVIVWNDLAG GDRVYAAGLV AFNSIFQVLF YSVYAYVFVT 
VLPPLFGLKG FNVNITIGEV AQSVFIYLGI PFLAGIISRE VLTRLFSKHW YEQKFLPAIS 
PITLIALLFT IVVMFSLKGQ LIVTIPIDVL RIAIPLSAYF AIMFFSAFYL SKRAGAGYSK 
STSLAFTAAG NNFELGIAVA IAVFGVGSGA AFAAVIGPLI EVPVLILMVR YAKSQRQSFA 
ALNRNV