Gene Dfer_0861 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0861 
Symbol 
ID8224430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp1025127 
End bp1026002 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content54% 
IMG OID644928727 
Productlipid A biosynthesis acyltransferase 
Protein accessionYP_003085281 
Protein GI255034660 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1560] Lauroyl/myristoyl acyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.652365 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTCA AGCGCGCATT GGAATACATC GGGTACAAGA GCGCCTATGG TTTCGTGTAT 
GTAATGAGCC TGGCCCCGAT GACGCTGCTG TACGGCATGG CTACGGTCGC CTTCATTTTA
GCCTATTACG TGCCCGGATA CAGAAAGGCG GTGGCGGTTC AGAACGTGGC CCGCTCTTTC
CCGGACATGC GGTATGGTGA GGTGGTCGGC ATTGTCAGAA AATTTTACAG CTGTTTCACC
GCCTATCTCG CTGAAATCGT AAAAAGTATT TCGGCACCGG CAGCGGTGCT CGGCAAACGG
ATGGTTTTCG AGAACGTTGA GCTTATCAGA ACGCACCTGA ATGCCGGAAC GAATGTCATT
GTCTGCCTGG GGCACTGCGG TAACTGGGAG ATGCTTAGTT TGATGCCCTA CAAACTTGGC
CTGGACATGT ATGCCGTGTA TAAGCCTCTG CGTTCGCAAA CTATGGACAA ACTCATGATT
AAACTGCGGT CGCGGTTCGG CATGAAGCTT ATACCCGACA AGCAGGTGAC GCGGCATATC
CTCACCAGGA GATCAGCACC AGCCGCGTAT CTGTTCCTGG CAGATCAGTG CCCATCCGTC
GGGGATGATA GCATCAGGCT CGACTTACTT GGCCAGCCCA CATATGTCGT CTCAGGCATG
GAGAGACTGG CACGGCAGAG CGGATCGGCG GTGGTGTTCC TGCATGTGAC ACAGCTTTCG
AAGGGATATT ACGAAGTGCG CTGCCTGCCG GTATGTGCCC AGGCGCAGTG CACGGTCAAC
GGAGAAATCA CGAGAAAGTA CGTCTCACTG CTTGAAAACA ATATCCTCGC AGAGCCGTAT
GGTTGGTTAT GGACCCACAA GCGCTGGAAA AGATAG
 
Protein sequence
MKVKRALEYI GYKSAYGFVY VMSLAPMTLL YGMATVAFIL AYYVPGYRKA VAVQNVARSF 
PDMRYGEVVG IVRKFYSCFT AYLAEIVKSI SAPAAVLGKR MVFENVELIR THLNAGTNVI
VCLGHCGNWE MLSLMPYKLG LDMYAVYKPL RSQTMDKLMI KLRSRFGMKL IPDKQVTRHI
LTRRSAPAAY LFLADQCPSV GDDSIRLDLL GQPTYVVSGM ERLARQSGSA VVFLHVTQLS
KGYYEVRCLP VCAQAQCTVN GEITRKYVSL LENNILAEPY GWLWTHKRWK R