| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0810 |
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| Symbol | |
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| ID | 8224379 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 959809 |
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| End bp | 961308 |
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| Gene Length | 1500 bp |
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| Protein Length | 499 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644928681 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003085235 |
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| Protein GI | 255034614 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.00428067 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAA TAATCATTGC CGGCTTGCTG GCGGCGAGCC TGTCGATCAG CGGCTGCGAG
AAAAACTTTG ACCCGGTACT AACCGGCACG CTTTCCCCGG CTAACTTTCC GAAAACGGAG
GCCGACTTTA AACTTTACAT TTTGCAGGCA TACAAACCCT TCGGTTCCAA ATGGGGATAC
AATGATGTTG CATATCAAAA TATGTTTTTC AGCCCGGAAT ACGGACATCT GGCCATGTTT
GATTTGCCTT CCGACCAGAT GAACATTTTT ACTGAATGGG GCGGCTTCTG GGAGTTTTTC
AGCAAAGGCG ACTTTACATT CCTGCGAACG CAGGGCAAAC AAAGCCACTT CGAAAAAGTG
CGCTACCTTA CCCGCATGAC GCAGGTGATT TCGGACATCG AAAAATCGGA GATTGCCGAC
GATGCCAAAA ACAAATTCAT CGCCGAAGCC CGGATGGGGC GCGCCTGGAC CATGTATTAC
CTGCTGCACA TGTACGGCCC TGTTCCGGTG ATCCTGGACG CATCGAAAAT CAATACGGAT
GCCGAAAGTG ACCTGACCCG CCCTTCCCGG GATTCTTTTG TGGCTACAAT AGCCGCTGAT
TTGCGTTTTG CAGCCGAACA CCTGGAACTC AGCCCATCGG AATACGGGCG TTTTAATAAA
GGTTTGGCAT TAGGGACATT AACCCGGCTT TTCCTCAATG AAAAGAATTG GGCAGAGGCC
GAAAAGGCGG CACGGGCGAC GATCGCATTG GGTAAATATA GTCTGGTGCC AGACTATGCC
GGGCTTTTTC GCGAAGCGAC AGAAGTGAAC AATGAAACGA TCTGGGCGGT AAGCTGCGAT
CCTGTGTCGA CGGGCGAAGC AGGCGGAAAC TTCAATGCGC TGGCAATGTA TTGCCTGCCG
GGCGATTACA AAAGCAACAA GGTCAATGGC GGCTGGGCCA GTCCAAGCGG TGTATTCTGT
CCAACCTGGG CATTTTATGA CTCCTTTGAC CCGGCGGATA AACGGCGTGA GCTGATGCTG
CCGGCTTACA CCGACAAATC CGGAAAAGCC AGGAACCGCG CCAACATGCG CGGCCCGATT
TTGAAAAAAT ACCCCGACGA ATCCACCCCT GGCGCTGATA TTCAGGGCAA TGACATTCCG
GTACTGCGCT ACGCCGATGT CCTGCTGATG CTTGCCGAAG CCATCAACCA GCAAGCCGGC
CCTACTACCG AAGCAATCGC ATTGGTGAAT GAAGTAAGAA CCAAACACGG TGGCATCGCC
GCATTACCCG CCACAGCCAC CGCTAACAAA ACTGCTTTCA ACGATGCGAT CTTACGCGAG
CGCGGCTGGG AATTTTACTT TGAAGGCATC CGTAAAATCG ACTTAGTACG TCACGGCAAA
TGGGCATCCT CCCTCGAAGC CGCCGGAAAA GTCACCCGAG GCCCATCCGA ACTATTTCCT
GTTCCGCAAT ATGTGATTAA TGTGGGCGAA GGGACGATTG AGCAGACGAC GGGGTATTGA
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| Protein sequence | MKKIIIAGLL AASLSISGCE KNFDPVLTGT LSPANFPKTE ADFKLYILQA YKPFGSKWGY
NDVAYQNMFF SPEYGHLAMF DLPSDQMNIF TEWGGFWEFF SKGDFTFLRT QGKQSHFEKV
RYLTRMTQVI SDIEKSEIAD DAKNKFIAEA RMGRAWTMYY LLHMYGPVPV ILDASKINTD
AESDLTRPSR DSFVATIAAD LRFAAEHLEL SPSEYGRFNK GLALGTLTRL FLNEKNWAEA
EKAARATIAL GKYSLVPDYA GLFREATEVN NETIWAVSCD PVSTGEAGGN FNALAMYCLP
GDYKSNKVNG GWASPSGVFC PTWAFYDSFD PADKRRELML PAYTDKSGKA RNRANMRGPI
LKKYPDESTP GADIQGNDIP VLRYADVLLM LAEAINQQAG PTTEAIALVN EVRTKHGGIA
ALPATATANK TAFNDAILRE RGWEFYFEGI RKIDLVRHGK WASSLEAAGK VTRGPSELFP
VPQYVINVGE GTIEQTTGY
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