Gene Dfer_0717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0717 
Symbol 
ID8224286 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp846263 
End bp847453 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content56% 
IMG OID644928590 
Producthistidine kinase 
Protein accessionYP_003085144 
Protein GI255034523 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGTCG CCACGCTGGT AGTGATGGGG TATGTGCTGA TATTCAGTCT GGCGATGGGA 
ATGATCACCT ATGCCTGGCT CACAGCCGCG CTCATCCCGC TGCAATTGTT GTTATATTAC
CTCTCCCGCG TGAAAGGACT TACCACCCTG TCGCCGGCCA TTTATTCTGT GCTTTTCCAC
CTGTTTTTTG TCGTGAGCTA TCGCGTGAGT GCGGGCATTA CGGGCTCCAC GCTGCTATCG
CTAACGCTAG TCTATTTCTG CTCGCTCGTG ATCGCGTCCC CGCGGGCGTA CCTGCCGCTC
ACGGTGATCA ACCTGGGCAC GGTGGCCGCA TTGCTCCTGC TCGAATACCG CAACCCGACA
TTTGTCCTCA CCTCCTACGC GAGCCGGGAA GAGCATTTTA TCGACATCGC CTCCACCTAT
GCCGTCACGG TCATCACATC ATTGATCGGC CTCGGGTACA TTATCAGCAA TTACCGGAAG
GAGAAAGACA ATGCCGAAGA ACGGGCGCTG CTGCTCGACG TCCTGCATGA TGAAAAAGCC
AGGCTGATCG CCGTGATATC CCACGATTTC AACACGCCGC TCATTTCCGT TAAAAAATAC
CTTGATATCC TGGGGAGTTT CGAGCTCACC GCTGCCGAGC GGCAAATGCT GGAATCCGAG
CTCCGGCAAT CCGTCGTGAA CACGCAGAAT TTGCTGATGA ACCTGCTGGA TATGACTAAA
TCAAATGACA GAATACGGCA CCGCAGCACA TCTTTCAATC CGCTGGATGC GATTGAGGAC
ACCCTGAAAG TGTACCAGGA CATCGCCCGG GAAAAGGGCG TTCTGTTTGA GCCCGAAATA
CCGGACTCGC TCACGCTCAA AGGCAACCCG CACCTCTTCA ACATCGTGAT CCGCAACCTG
ATCAACAATG CAGTGCGCGC CTGCAAGGCT TCGGACCGCG TCCGCCTGAC GCACGAATAC
CACGGCAACT GTCACCAGTT CAGCGTGAGC GACACCGGCC CCGGCCTTTC CGAAATTGCT
GAGAAGGAAA TTATGGAAGG CTGGCAGGAC CATTCCATGC AAAGCCTGCG CTCTGGCGGC
CTGGGCCTGA TACTCGCCAA AAAATACGCC GGGGCGCTCG GGGGAGAACT GGCATATACC
ACCGAAATCG GCAAGGGAAC CGTGTTCTCC CTCACCATTC CGATCGGATA A
 
Protein sequence
MCVATLVVMG YVLIFSLAMG MITYAWLTAA LIPLQLLLYY LSRVKGLTTL SPAIYSVLFH 
LFFVVSYRVS AGITGSTLLS LTLVYFCSLV IASPRAYLPL TVINLGTVAA LLLLEYRNPT
FVLTSYASRE EHFIDIASTY AVTVITSLIG LGYIISNYRK EKDNAEERAL LLDVLHDEKA
RLIAVISHDF NTPLISVKKY LDILGSFELT AAERQMLESE LRQSVVNTQN LLMNLLDMTK
SNDRIRHRST SFNPLDAIED TLKVYQDIAR EKGVLFEPEI PDSLTLKGNP HLFNIVIRNL
INNAVRACKA SDRVRLTHEY HGNCHQFSVS DTGPGLSEIA EKEIMEGWQD HSMQSLRSGG
LGLILAKKYA GALGGELAYT TEIGKGTVFS LTIPIG