Gene Dfer_0665 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0665 
Symbol 
ID8224234 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp777714 
End bp781028 
Gene Length3315 bp 
Protein Length1104 aa 
Translation table11 
GC content53% 
IMG OID644928538 
Producthypothetical protein 
Protein accessionYP_003085092 
Protein GI255034471 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.516386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATCCTC ACGAATCGAC ATACCCGTTT TTTGAAGCCA ACCAGGTTTT GAAAAAAGAC 
GATCTCAACA ACCTTTTCGA GTACCTCGAC GAGCAGAACC GGATGACCCG TACCAATCTG
ATCGGGATCG GCATTGTCTG CGGGATGGAT GTGATACCCG TGGCGCCTGC CGCGATCCGG
ATCACCCGGG GCGTCGGGGT CACGTCCGAA GGTTATCTGG TATCGGTTCC GGAGGTGGAA
TATGCCAACT ATTCGATTTA CCCGCCTAAT AAGGATATTT TCCTCGGCGA CGACTGCTAC
ACCGAGCTGC ACCAGGCCGG GCAAAACAAG ATGCACAAGC TGGTAGAGGG ACTTTCCCCC
GACAACAACC AGCTCTTCGA ACTCGTGGAA GGCACGCCCG CCGGCTCCAC GGCGCTTACC
GCCGCGTTTC TGGCTGATAA GGTTGTTTTG ATTTATGTTG AGTTATCCAA AAACGGGCTG
AAAAACTGCT CTCCTAATTC CTGTGACGAT AAGGGCTCTG AAATAGCGGT TCAATTCCGG
CGGTTCCTCG TGACGAAGGC GAATGCGGAT CTCATCAAAA AAGAAGCGGT GGAACTGATA
GGAATACAAT CGGAACTGGA TATTGAGCAG ATTGTAGAAG CTAAAATCCT GCTCCCGACC
ATCCGGCTGA AAAGATTCGA TGTCCCGAAC AGCAATCCGG TCACCACGGG CGACATTATC
GCCGCCTACC GCAAAATCCT CACCAAATCA TTCATCGAAG ACACGCTTCG CACCAACCTG
GTGAAGCTTT TCGAGGTGTA CGAAGCCATA TTGACCGGTT TGGACAAAAC CATTATCCAA
AATTGGACCG GCGTGTACGA CGGCCTGTCC GTGAAATTCC TCCGGCCGTA CGAATACCAG
TACTTTTACG ACCTGGTGAG TGATCTGATC CATAATTATG AGGAAATCAA GGCGAAAGGG
CTCGAAGTGC TGGCATTATG CAACCCCGAT TGCCGGATGT TCCCGCGCCA CCTGTTCCTC
GGCGCTGCCA CCGTCGACAC CACGCAAAAC AGGGACGTGT ACCGGCAGTA TTTCATCCCC
TCTCCGATCA TCGGCAACCA GAAAAAAGCG GGGGAAGAAT TGAAACTGCT TTTCACCCGG
ATGCTCGCGC TGATCGAACG GTACAAAATC CCCCAGCCCG CCAGGCTGGA AATCAAAGGC
CGGATACTGG ATGCCAATAT CCGCATTACG CCCAGCAAGC TGGGGGATTG GCCATTATCG
CAAAAGGCGA TTCCCTACTA CTACGAGGTG AATGCCGGCA CGCCCAGGCT CTACGAAACC
TGGCGCTATG ATTTGAAAAA ACAGGGGAAA GAAAAACAAA ATCTGTCTTA CCACGCCGAT
TTGTATGCAA ATCCCGCCGA CGATTTTGTA CTCAATCCCC TCGGATACGA CCTGGAACCT
TACAATTTTC TACGGGTCGA AGGCATTGTC GGAAAGCCCT ACCAGGAAGT GTTGGCCGCG
ATGAACCAGT ACATCCGCCA GCAACGACTG CCGTTTGATG TGGTGGCGCT CAGCACGGGA
AACGAGCCGC TCCAAATCGA AATGGATATG GCTGATTTTG AATGCCATGC GGCCGATCTC
GAAGTGCTGT ACGATGTGCA GCGGACCGAA TTCCGCTGCC TGATCAGCGA AATGAAAGAC
AACCGTCGGT TCGATGTGCT GGTGGGCCTT TTCCCGGCTA ACCTTGCACA GGTCACCAAC
GAGGCATATG CGGAAATCCG GAGGGTAGTC GACGCATTCG ATTTCACCGA CGCGGATTCC
GTGGAATGCA AAGTTCGCAT ACTGATCGGG CTGATCACGG TGTACAGAAG ACGGCTCGAA
AAACTGCGCT CTAACTTCCT GTTCAGCAAC TACACGCGCA ACAACCCGGG CATTCAGCAC
AAGGCGGGCG TGCCGGTAGG CGGCACATTT GTGATCGTTT ATCATGGCAA TATCAAATCC
TACTACTCGC CCAGAGATAC GATTGGTATA AGGGAAGCCG TTGCCGAACG CCCCACGCGC
GTAAATGCGA CCGCCGAAGC ACTTCCCGAG AACGAAGTAA TTGTTAAAAC CGCCTCCGGG
GACGCGAATG TTCTGGGTTT GTCAGAAAAA ATGCTCAGTG AAATTTCCGT ATTGCCTGCG
GGAATCCGCG AGGAACTGGT GAAAGTGCTG GGTGATAGAC TGGCCGGCAT TTTCAATCAG
AATGAGGATG TGGGGATCGA GGCGGGCACC GTGTTTGCCG ACTTCTTCCT GCCCTACCGC
TGCTGCACCG ACTGCACGCC CGTGCAAGTA GTAACGCCGC CCAAAAACGA CCCGCTGAGC
GCCACCGTCT CCGAGCCCAA ATGCGACGAA AACAACAAGA ATTTCACGGT AACCATCACC
ATATCGGGCG GCACGCCGCC TTACACCAGC GACGCCGGGC CAGTTACAGG CAACACGCTC
ACCGTCACCC TCACCACCGG AAGCACACAG AATGCAGGCA TCAAAGATGC TGGCGGTCAG
GAAATCAGCG TAACGATTCC CGCGCATACC TGCGGCTGCG ATCTGCCGTG CGATGGACTT
GCAGAGCGAT GCTTCTACCC GGTGTGGATC AACAAACCTG CGAAAGGCGC CATGATCACG
CAGAAATCCG TGGAAGTGGC CAAACTTACC GTGGTAGACA GGGAAAACGG AACATCCTTC
GATATCGATT TCAGGGAAGA GTTCCAGTCG ATTTTCGCCC AGTTCGACGA TACCTCCTAT
GCCGGTGCGG TGCGATCATT GCTCAAAGCG ATCAACACGA AAATCAGGGA GAAAACCGGC
GGCAAAAACC ACTTTATCCT CGGGTTTGAC CGGACAAACG ACCTGATGGC GATTGAACAT
TACATATGCC ACGACTTCAC GATCGAGCTC GTGTGGCAAT ATTCGGTAGG CCGCCGGGTA
AACATTACGT CCAGCGCCAT GTACAACGAG AAATCGTGGA ACATTAAGAA CGACCTGTGG
TCCGTGGAAG GCGCAAAATT CGGCTGTTTT GCACTCGACA AATGCGCCGA TAAGGAAGAA
GAGCTCTGCA AAGAACCCAT CAAACCCGAA TCGATCAGGC TATCGTTCGA CAAGGCGGAA
AATGAGTTCC ATTACAAGGT CGAAAGCGAA GTTGAGCCCG ATTTCGTGCT TTGGATTTTC
GAAACCGAAA CGCCCGAGTA CTCGAACAGC AAATCCGGCA AATTCAGCAG CAGGCTGGAC
AGCGTAAACG TGAAGCTGGT GTTCGTCCTG GGCGCATGCT TCGTGATTGT GGAAGCCACT
GTACCAAACG CCTAG
 
Protein sequence
MYPHESTYPF FEANQVLKKD DLNNLFEYLD EQNRMTRTNL IGIGIVCGMD VIPVAPAAIR 
ITRGVGVTSE GYLVSVPEVE YANYSIYPPN KDIFLGDDCY TELHQAGQNK MHKLVEGLSP
DNNQLFELVE GTPAGSTALT AAFLADKVVL IYVELSKNGL KNCSPNSCDD KGSEIAVQFR
RFLVTKANAD LIKKEAVELI GIQSELDIEQ IVEAKILLPT IRLKRFDVPN SNPVTTGDII
AAYRKILTKS FIEDTLRTNL VKLFEVYEAI LTGLDKTIIQ NWTGVYDGLS VKFLRPYEYQ
YFYDLVSDLI HNYEEIKAKG LEVLALCNPD CRMFPRHLFL GAATVDTTQN RDVYRQYFIP
SPIIGNQKKA GEELKLLFTR MLALIERYKI PQPARLEIKG RILDANIRIT PSKLGDWPLS
QKAIPYYYEV NAGTPRLYET WRYDLKKQGK EKQNLSYHAD LYANPADDFV LNPLGYDLEP
YNFLRVEGIV GKPYQEVLAA MNQYIRQQRL PFDVVALSTG NEPLQIEMDM ADFECHAADL
EVLYDVQRTE FRCLISEMKD NRRFDVLVGL FPANLAQVTN EAYAEIRRVV DAFDFTDADS
VECKVRILIG LITVYRRRLE KLRSNFLFSN YTRNNPGIQH KAGVPVGGTF VIVYHGNIKS
YYSPRDTIGI REAVAERPTR VNATAEALPE NEVIVKTASG DANVLGLSEK MLSEISVLPA
GIREELVKVL GDRLAGIFNQ NEDVGIEAGT VFADFFLPYR CCTDCTPVQV VTPPKNDPLS
ATVSEPKCDE NNKNFTVTIT ISGGTPPYTS DAGPVTGNTL TVTLTTGSTQ NAGIKDAGGQ
EISVTIPAHT CGCDLPCDGL AERCFYPVWI NKPAKGAMIT QKSVEVAKLT VVDRENGTSF
DIDFREEFQS IFAQFDDTSY AGAVRSLLKA INTKIREKTG GKNHFILGFD RTNDLMAIEH
YICHDFTIEL VWQYSVGRRV NITSSAMYNE KSWNIKNDLW SVEGAKFGCF ALDKCADKEE
ELCKEPIKPE SIRLSFDKAE NEFHYKVESE VEPDFVLWIF ETETPEYSNS KSGKFSSRLD
SVNVKLVFVL GACFVIVEAT VPNA