| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0640 |
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| Symbol | |
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| ID | 8224209 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 740150 |
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| End bp | 743527 |
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| Gene Length | 3378 bp |
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| Protein Length | 1125 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928514 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003085068 |
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| Protein GI | 255034447 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.138421 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAAAC TATTACACGT TAAAGTTCTG GTAACCTTAA TGGTGGGATG CCTGTTGGAC
GGCGCACCGC TGAAAGCCCA GCTGATGGCC CAGAACCGTC CGAAAAACAC AACAGCTCCC
ACAACGATCC CCGGAAGCCG CGTCGCACTC AGGGATGCAT TGATGCAGGT GAAAAAGCAA
TACAAAGTGG ATATCCTGTT TGAAGAAAAA CTGCTGGAAG GCATTTTCGT CGCCCCGGCT
CAGGCACAAT CCGGCCAGAC GATCGAGACC CGGCTGAACA GCATGCTTTC GCCCTCGGGA
CTACGGTACA AAAAGATAAG CAAGCAAACA TACCTCATCC TCAACACCGC CGACGCCGCC
AAGCCGGGCG CGCAGCAGGG CGAACAACCG GCCGAAAGCG AAGCCGCGCC CGCAACGCAG
GTTACCCTCA CCACCACCAC GCAACACCAT ACTCCCGCTG TGGAGGCCGT CGCCGCGGCG
GCTGAGAGGA CCGTGAGCGG CGTCGTGAAA GGCGATGCCG GTGAATTGTT GCCCGGCGTG
AGCGTGCTCA TCAAAGGTAC CAACCGCGGC AGCACCACCG ATGCCGAGGG CAAATACAGC
ATTTCCGTCA GCGACAATCC CGGCACGGAG GTGATCCTGG TATTCTCCTA TGTAGGTTAC
CAAAACCAGG AGGCGACGGT AGGCACGCGG TCCACGATCG ACATTGCCCT CGCCCCAGAC
CTGAAAAGCC TGGAAGAAGT GGTGGTGGTG GGTTACGGAA CGCAAAAACG CGAGCAGATC
ACCAGCGCGA TCGCGAGTGT GAAAGCCGAA GATTTTGTAA AAGGCCCCGT GCAGGATGCC
GCACAGCTGA TCAGGGGTAA AGTGGCCGGC CTAAGCGTGA TCACTCCCAG CGGCGACCCT
ACGGCCATTG CCCAGATCTC GCTCCGGGGC AGTGCTACGA TCAACGCCAG CGCGGAACCG
CTCGTGCTGA TAGACGGCGT GCCCGGCGCA TTGAACACCG TGGCCCCGGA GGATATTGAG
TCGATAGACG TGCTCAAAGA CGGCTCCGCC GCTGCCATTT ACGGCACCCG CGGTTCCAAT
GGCGTAATCC TGATCACCAC CCGGAAGGTC AAAGGCGAAA CGCCGGCCAC GCTGGAAGTA
AACTCCTATT TCACCACCCA GCGGCTAACC CGCAAGCTGG ATTTCATGGA TGTGAACCAG
TACCGCGCAT TGGCGGCACA AGGTAAGCCG GGTGCTATCG ACTACGGGCA AAACACCGAC
TGGCTCAGTC AGGTAACCCA GAAGCCATTC TCGCAGGTAC ACAACATCAG CCTCCGCGGA
GGCTCGCGCA CGACCAACTA CATCGTGAGC ATGGAGTACC GCCGCCTGAA CGGCATCATG
AAAAAATCCG ACAACACAAC CGTATTCCCG CGGATAGAGG TAAACCATTC GATGTTTAAC
GGATTATTGA AAATCAATGC CAACCTGAGC GGCTACCAGC AGAAATACTT TTCGATCGAC
GGCGGCTCCT ACTCCGGCCT CGTTTACCGC AATGCGCTCA CTTTCAACCC CACCGAACCT
TTGAAGGATG AAAACGGGAA GTGGATAGAA CGCACCGATA AAACCGACTA CATGAACCCG
CTCGCGCTCA TCGAGGAATC GGAAGGACAT AACCGGAACA ACAACCTGCG GACCTACGGC
ACAATCTCCC TCGCACCCGT GGAAGGACTG GAAATCAAGG CCTTATTTGC ACGGGATATG
TTCAACAGCA CCCGGGGGTA CTACGAAACT AAAAGTCACT ACTCCACCAG CCGCAGCGGC
CGGAACGGCT TTGCCTCGCG CGGCACAACC CGCTCCCAGG ACGACCTGTT TGAATTTACT
GCCAATTACA ATAAATCCAT TCACGACCAC AACTTCGTGA TCCTGGCCGG TCACACCTGG
CGCCGCTACA ACACCGAGGA ATACTGGATG CAGAACTGGG ACTTCCCGAC CGATAATTTC
TCGTACAACA ACATCGGGGC CGGTCTGGCG CTCCGCCGCG GCCAGGCGCC CGAGTCGTCG
GTGCAGTCGG AGAACAAGCT GATCAGCTAT TTTTTCAGGG TCAATTATAG TTTTATGAAT
AAATACCTGC TTTCGGCCAG TATCCGTCAC GAGGGTTCGT CGCGCTTCGG GGCGAATCAC
AAATGGGGCA GCTTCCCGGC GTTTTCGGTG GGCTGGAACC TGAAAAGGGA GGCATTTCTG
GAAAGTTCCA ACACCATTTC GAACCTCAAA CTCCGGGCAG GTTACGGCGT AACCGGTACT
GAACCCGGCA GCTCGTACAT TTCTTTGAAT AAAATCAATT TCAATACCAA TGTGCTCATC
AACGGCCAGT GGGTGCAGGC GATCAACCCA TCGAACAATG CCAACCCCGA CCTGCGCTGG
GAACGCAAAG AGGAAGTGAA CGTAGGTATC GACTACGGCT TCCTGAACGA ACGCCTGTCC
GGCTCGATCG ACCTCTACCG CCGCACCACC CGCGACCTGA TCGCCAACTT CCCCGTGCCC
ACGCCGCCCT ATTTGTACAG CACCATCACA GCGAATGCCG CTTCCATGGA AAACAAAGGC
ATTGAAATCC AGCTGAATGC CATTCCGGTG CAAACCGCCG CTTTCCGCTG GTCTACCTCC
GTCAATTTTT CGACCAATGC CAATAAGATC CTGTCGCTAT CCAACGACAA ATTCGCATTA
GCCAGCGGCT ATTTCGACAC TGGGAATACC GGCGAGCCCA TTCAGCAAAA CACCCACCGC
GTGCAGGTAG GCCAGCCGCT GGGTAACTTC TGGGGCTTCA AAACAATCGA CATCGACGAA
ACCGGCCATT GGATCATCGA GGGCAAAAAC GGCGAACCGA AGCCCATTGC CCAGCAGCAG
GCGGACGATA AGCAGGTTAT CGGTAACGGA CTGCCCCGCC GCTATCTGAA CTGGAACAAC
ACATTGAATT ACAAAAACTT TGACCTGAAC ATCACCATGC GCGGCGCATT CGGCTTCCAG
ATCCTGAACA TGACCGAAAT GTTCTGGAGC GCGCCGGTGA TGCTCACCCG CGGTAACCTG
CGCTCGAATG CCTACGACCC GATTTACGGC AAACGCCCGC TGGCCGACGA CCAGTCGCTG
AACTACGTGA GCTACTACAT CGAAAACGGC AATTACTGGA AGATCGACAA CATCACCGCC
GGCTACAATG TACGCCTGAA AAACAAGTAC CTCAGACATG CGCGCGTTTA CCTGGCCGTT
GCCAACCTGT TCACGATCAC CGGCTACAAG GGCATCGACC CCGAAGTAGG GATCGCCGGA
CTGGCGCCGG GCATCGACGA TAAGAACCGC TACCCGGCTA CCACAAGCTT CACAGCGGGC
GTATCGCTCA CATTCTAG
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| Protein sequence | MTKLLHVKVL VTLMVGCLLD GAPLKAQLMA QNRPKNTTAP TTIPGSRVAL RDALMQVKKQ
YKVDILFEEK LLEGIFVAPA QAQSGQTIET RLNSMLSPSG LRYKKISKQT YLILNTADAA
KPGAQQGEQP AESEAAPATQ VTLTTTTQHH TPAVEAVAAA AERTVSGVVK GDAGELLPGV
SVLIKGTNRG STTDAEGKYS ISVSDNPGTE VILVFSYVGY QNQEATVGTR STIDIALAPD
LKSLEEVVVV GYGTQKREQI TSAIASVKAE DFVKGPVQDA AQLIRGKVAG LSVITPSGDP
TAIAQISLRG SATINASAEP LVLIDGVPGA LNTVAPEDIE SIDVLKDGSA AAIYGTRGSN
GVILITTRKV KGETPATLEV NSYFTTQRLT RKLDFMDVNQ YRALAAQGKP GAIDYGQNTD
WLSQVTQKPF SQVHNISLRG GSRTTNYIVS MEYRRLNGIM KKSDNTTVFP RIEVNHSMFN
GLLKINANLS GYQQKYFSID GGSYSGLVYR NALTFNPTEP LKDENGKWIE RTDKTDYMNP
LALIEESEGH NRNNNLRTYG TISLAPVEGL EIKALFARDM FNSTRGYYET KSHYSTSRSG
RNGFASRGTT RSQDDLFEFT ANYNKSIHDH NFVILAGHTW RRYNTEEYWM QNWDFPTDNF
SYNNIGAGLA LRRGQAPESS VQSENKLISY FFRVNYSFMN KYLLSASIRH EGSSRFGANH
KWGSFPAFSV GWNLKREAFL ESSNTISNLK LRAGYGVTGT EPGSSYISLN KINFNTNVLI
NGQWVQAINP SNNANPDLRW ERKEEVNVGI DYGFLNERLS GSIDLYRRTT RDLIANFPVP
TPPYLYSTIT ANAASMENKG IEIQLNAIPV QTAAFRWSTS VNFSTNANKI LSLSNDKFAL
ASGYFDTGNT GEPIQQNTHR VQVGQPLGNF WGFKTIDIDE TGHWIIEGKN GEPKPIAQQQ
ADDKQVIGNG LPRRYLNWNN TLNYKNFDLN ITMRGAFGFQ ILNMTEMFWS APVMLTRGNL
RSNAYDPIYG KRPLADDQSL NYVSYYIENG NYWKIDNITA GYNVRLKNKY LRHARVYLAV
ANLFTITGYK GIDPEVGIAG LAPGIDDKNR YPATTSFTAG VSLTF
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