Gene Dfer_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0630 
Symbol 
ID8224199 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp724872 
End bp725996 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content56% 
IMG OID644928504 
Productoxidoreductase domain protein 
Protein accessionYP_003085058 
Protein GI255034437 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0605312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.23471 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA TCCTTCAAAG AAGACGGTTT CTGCAACAGG CGGCACTGGC TGTTCCTGCA 
CTCGGGCTGG TGAGCCTCGA CGACGTGGCG GCTCCATATG CGCCGGAAAA CGGGCAACCC
TGGGCGCAGG ATAAAAAGTT AGGAATCGCT TTGCTGGGAT TGGGCAAATA CAGCGAGGAG
CAACTCGCAC CGGCGCTGGA AAAAACGCAG CGGTGCAGGC TGGCGGGTAT TATCACCGGA
ACACCCGAGA AGGTCGGGAA GTGGAAAGAA CGGTACAAAA TCCCCGACAA GAATATCTAC
AACTACCAGA ACATGGATTC GATACGCGAC AATCCCGACA TCGACATTGT GTACGTGGTT
ACGCCCAATG CGCTGCACGC CGAGCACACG ATCCGCGCCG CGAAAGCCGG TAAGCATGTG
ATCTGCGAAA AGCCGATGGC TACGAGCGTG GAGGACTGCG AAGCGATGAT CGCCGCTTGT
AAGAATGCCG GCAAAATGCT TTCCATTGGT TACCGGCTGC ATTTCGAGCC GCACCACCAG
ACATTTATGC AGTTTGGAAA AAAGAAATTG TACGGCGACG TGCAAAAGAT CGTGGCCGAG
AACAGCCAGG AAATGGAAAA AGGCGTGTGG CGCCTGGACC GCGAGCGCTC AGGCGGCGGG
CCGCTGATGG ACCTCGGCAT TTACTGCGTG CAGGGCGCCC TTTACTCGGC TGGCGCAAAT
CCCGTGAAAG TGGCAGCCAA AGAAGGCCCG AAAACCGACG TCGAAAAATT TGCCGAAGTC
GAACAATCAA TTGATTTCCA GCTGGAATTT CCCGGCGGCG CCGTGGCGAA CTGCCGGACG
GCCTACGTGG GCAGCGGCAA CCGGCTGCGC GTGGAAGGGA AAAAAGGCTG GTACGAGCTC
GAACCTGCCT ACGAATACAA GGGCATTAAA GGTAAAACTT CCCAGGGGCC GATGGGTTTG
GAGAATGTAA ACCAGCAGGC ACTTCAGATG GACGATTTTG CGAACTGTGT TCTCAACAAC
AAACCCACCC GCGTGCCGGG CGAAATGGGC CTCCGCGATG TGAAAATCCT GATGGCGATT
TACGAAGCGG CCCGCACGGC CCAGCCCGTG ACCCTGAAAT GGTAA
 
Protein sequence
MENILQRRRF LQQAALAVPA LGLVSLDDVA APYAPENGQP WAQDKKLGIA LLGLGKYSEE 
QLAPALEKTQ RCRLAGIITG TPEKVGKWKE RYKIPDKNIY NYQNMDSIRD NPDIDIVYVV
TPNALHAEHT IRAAKAGKHV ICEKPMATSV EDCEAMIAAC KNAGKMLSIG YRLHFEPHHQ
TFMQFGKKKL YGDVQKIVAE NSQEMEKGVW RLDRERSGGG PLMDLGIYCV QGALYSAGAN
PVKVAAKEGP KTDVEKFAEV EQSIDFQLEF PGGAVANCRT AYVGSGNRLR VEGKKGWYEL
EPAYEYKGIK GKTSQGPMGL ENVNQQALQM DDFANCVLNN KPTRVPGEMG LRDVKILMAI
YEAARTAQPV TLKW