| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0610 |
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| Symbol | |
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| ID | 8224179 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | + |
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| Start bp | 694472 |
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| End bp | 696058 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644928485 |
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| Product | glycoside hydrolase family 28 |
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| Protein accession | YP_003085039 |
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| Protein GI | 255034418 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.826253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCATT CAGGACATTC CTTTTTTCTC TTTTTGATAC TTACTTTTTG CGGCAGCACA
TTTTCTAACG GGCAGCCGCT GGACGCAGCG AGCCTTTCGT CGGTGCCCCG GGTGGCGGAC
GTGGGTGCTG CCAGGCTCCC GGCCGCTATT GCTCCGGTGA AGGCGCCATT CCCGATGCCC
GCGTTTGCAA AGCCCGTTTT TCCCAAACTT ACCATTCGCA TTACCGATAA AGGCGCCCGC
GCGGGTGCAA TGGCGACAAA GGCGATCCAG TCGGCCATCG ACGAGGTGAG TAAAAAGAAG
GGCGGGACCG TGATAGTGCC CGCCGGGACC TGGAGAACCG GGCGAATCAG CCTGAAAAGC
AATGTGAACC TGCATATCAG CGAAGGTGCC GAGCTGCGTT TCAGTCCTGA AATCGAGGAT
TACCTGCCGG CCGTGTTCAC CCGGAACGAG GGCGTGGAAC TGATGTCACT CGGCGCCTTG
ATATATGCGA ACGGCCAGGA GAACATCGCC GTGACGGGCA AAGGGAAGCT GGTTGGCCCG
CCCGACGGAC CGGTGAGACA GCGTTATATG AATGTGAACG TGATCGAGAA AGTGGTGCCG
GCCGACAAGC CCGTGAGCGA GCGGGTGTAC GAAGGCAAAG ACGGCGGCTT TATATTCCCG
CCGATGTTTA TTTCGCCCAT TAATTGTAAG AAGGTTTATA TCGAAGGCAT TACGCTACAT
AATACGCCAT TCTGGAACGT GGTGCCCGTT TACTGCGACA ACGTGATTAT CAGGGGCATT
ACCGTGCAAT CTGTGGGTAT TCCGCGTGGC GACGGCATCG ATATCGAATC GTCGAGAAAT
GTCCTGATCG AATACTGCAC GCTCAGCAGC GGCGACGACT GCTTCACGAT CAAGGCGGGC
AGGGGCGAGG ACGGCATTCG GGTGAACAAG CCCACCGAGA ATGTCGTGAT CCGGCATTGC
CTTGCGCGCG AGGGCCACGG AGGCATTACC TGCGGCAGCG AAACCGCCGG GATGATCCGC
AACGTGTACG TGCGCGACTG CGTGTTCGAC GATACCGATA CCGGGCTGCG TTTCAAAACG
CGGCGTTCGC GTGCGGGCGG CGGCGAAAAC ATCGTGTACG AAAACATCCG CATGAATCTC
CGCGGCGACG CCGTGAAGTT CGATATGCTG GGAAGCCGGC AATATGTGGG CGAGCTCGCC
GACCGCCTGC CGCCCCGCCC CGTGAATGAC CTCACACCGG CCTACCGCAA CATCACAGCC
CGCAACATTG TCGTGGACAA AGCGCGCACA TTCATCGACA TTACCGGCAT TCCCGAATCG
CCGGCCGCCA ACCTGCTGAT CGAAAACGCC ATCGTCAATG CCCGCACGGC ATTCAAGGCG
AGTGATGCAG AGCGGGTAAC CGTTCGCGGT GCGACGCTCA CCGTCACGGA CACGCTCCTG
CGTGCGCTGG ATGTTCGGAA TGTGCTGTTT GAAAAAGTGG AATTCAATAC GCCGGGAAAA
AAGCTGGCGA TTGCGGTAGA AGGTGAAAAT TCAAGTAATG TCCGGTTTGT GGATTGCACA
CCGGCGAAAC CAGAAGGGCT CGACTAA
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| Protein sequence | MKHSGHSFFL FLILTFCGST FSNGQPLDAA SLSSVPRVAD VGAARLPAAI APVKAPFPMP
AFAKPVFPKL TIRITDKGAR AGAMATKAIQ SAIDEVSKKK GGTVIVPAGT WRTGRISLKS
NVNLHISEGA ELRFSPEIED YLPAVFTRNE GVELMSLGAL IYANGQENIA VTGKGKLVGP
PDGPVRQRYM NVNVIEKVVP ADKPVSERVY EGKDGGFIFP PMFISPINCK KVYIEGITLH
NTPFWNVVPV YCDNVIIRGI TVQSVGIPRG DGIDIESSRN VLIEYCTLSS GDDCFTIKAG
RGEDGIRVNK PTENVVIRHC LAREGHGGIT CGSETAGMIR NVYVRDCVFD DTDTGLRFKT
RRSRAGGGEN IVYENIRMNL RGDAVKFDML GSRQYVGELA DRLPPRPVND LTPAYRNITA
RNIVVDKART FIDITGIPES PAANLLIENA IVNARTAFKA SDAERVTVRG ATLTVTDTLL
RALDVRNVLF EKVEFNTPGK KLAIAVEGEN SSNVRFVDCT PAKPEGLD
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