Gene Dfer_0575 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0575 
Symbol 
ID8224144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp652708 
End bp653874 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content55% 
IMG OID644928451 
Productpeptidase C14 caspase catalytic subunit p20 
Protein accessionYP_003085005 
Protein GI255034384 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.107324 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAGGCT TAACCAAGAT CATTAACCAC TTCACACGCC GTGCCGGCGC ATGCTGGCTG 
ACGGCAGCAT TACTTCTGAC AGGCCCGCTA TGCCCCGGCC AGTCGTTTTA CGCCGTACTC
GTGGCCGACA CCCGCGATCC CGCGATCGGC TCGGGTTGTC AAAAAGACCT GGAAGAAATG
TCGGGCACAT TGCGGAGCAT TTCCAAAAAA ATCGAATACA ATTACCGGGA GATCGTCTGC
GATCAGGAAA AGTTTGGGAA AGCTGGCATT CAGGCGGCTA TTTCAAACAT CGAATGCAAG
CCGGAGGACA TCATTTTTTT CTACTACACC GGCCACGGGA TCAGCAACGA CGCCGACAGC
AGCCGCTTCC CGGTGCTTTA CCTGAAAGAC GAAAATCTTG AACTCGAAAT CATCCACGGC
CTCTTACGGG ACAAAAATCC GCGATTCTGC CTCACATTCG GCGATTGCTG CAATAACCTC
GTGACAGGCC CAACGCCGCC CGCCACACGG GGCATTACGG TTACAAAGGA CACCGAAATG
CTCCGCCAGC TTTTTGTGCA AGCCAATGGC GACCTGCTCA TCAGCAGTGC CAAAAAGGGT
GAAAAAGCGA CTGCACATCC CCGGGAAGGC AGTTTTTACA GCAACCACTG GATGCAGGCG
CTCGCCTATG CCGGCAGCAA AGACAAGCAA GCTTCCTGGG AAAAGCTGCT GGCCGATGCC
GAAAACCGGT TGCAGGAAAG CCTGAAAAAC TTCCCAGATT CTGTCAGGCA TCATTCGCAA
TGGATCGGCA ACTTCCCCGA GCGGATTGGA GCGTCCGGGA GTAGCGTCGC AAACACGCGG
GCCCGGGTGC AAGTGGTGGA CCTGCAACGC TACATTTCCA TCATCGCCGA CAAAAAGCTT
CCCGCCGCGG AACGCGAGCA GGCCGTGGAA ATGGCCGTGA GCCTGTTCGG AAAGGATTAT
ATGCAAAACG GCAAACGGCG ATCGCCTCAG GTGCAGGTGG CGCGCAGGGA CGGCACCACA
TTCGGTGTCC CGGTCAAGAT TTATTTCAAA AATCTCCTGT ATGTCAAATT CGACAAGGTG
GAAATTACCT CCTATGACGC CGCGACAAAG GCCGGGCTGA AAACGATTAC CGTCGATGAC
ACCGTGCCGA TTGCAGGTTT CCGGTAG
 
Protein sequence
MQGLTKIINH FTRRAGACWL TAALLLTGPL CPGQSFYAVL VADTRDPAIG SGCQKDLEEM 
SGTLRSISKK IEYNYREIVC DQEKFGKAGI QAAISNIECK PEDIIFFYYT GHGISNDADS
SRFPVLYLKD ENLELEIIHG LLRDKNPRFC LTFGDCCNNL VTGPTPPATR GITVTKDTEM
LRQLFVQANG DLLISSAKKG EKATAHPREG SFYSNHWMQA LAYAGSKDKQ ASWEKLLADA
ENRLQESLKN FPDSVRHHSQ WIGNFPERIG ASGSSVANTR ARVQVVDLQR YISIIADKKL
PAAEREQAVE MAVSLFGKDY MQNGKRRSPQ VQVARRDGTT FGVPVKIYFK NLLYVKFDKV
EITSYDAATK AGLKTITVDD TVPIAGFR