Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0575 |
Symbol | |
ID | 8224144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | - |
Start bp | 652708 |
End bp | 653874 |
Gene Length | 1167 bp |
Protein Length | 388 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644928451 |
Product | peptidase C14 caspase catalytic subunit p20 |
Protein accession | YP_003085005 |
Protein GI | 255034384 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.107324 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGGCT TAACCAAGAT CATTAACCAC TTCACACGCC GTGCCGGCGC ATGCTGGCTG ACGGCAGCAT TACTTCTGAC AGGCCCGCTA TGCCCCGGCC AGTCGTTTTA CGCCGTACTC GTGGCCGACA CCCGCGATCC CGCGATCGGC TCGGGTTGTC AAAAAGACCT GGAAGAAATG TCGGGCACAT TGCGGAGCAT TTCCAAAAAA ATCGAATACA ATTACCGGGA GATCGTCTGC GATCAGGAAA AGTTTGGGAA AGCTGGCATT CAGGCGGCTA TTTCAAACAT CGAATGCAAG CCGGAGGACA TCATTTTTTT CTACTACACC GGCCACGGGA TCAGCAACGA CGCCGACAGC AGCCGCTTCC CGGTGCTTTA CCTGAAAGAC GAAAATCTTG AACTCGAAAT CATCCACGGC CTCTTACGGG ACAAAAATCC GCGATTCTGC CTCACATTCG GCGATTGCTG CAATAACCTC GTGACAGGCC CAACGCCGCC CGCCACACGG GGCATTACGG TTACAAAGGA CACCGAAATG CTCCGCCAGC TTTTTGTGCA AGCCAATGGC GACCTGCTCA TCAGCAGTGC CAAAAAGGGT GAAAAAGCGA CTGCACATCC CCGGGAAGGC AGTTTTTACA GCAACCACTG GATGCAGGCG CTCGCCTATG CCGGCAGCAA AGACAAGCAA GCTTCCTGGG AAAAGCTGCT GGCCGATGCC GAAAACCGGT TGCAGGAAAG CCTGAAAAAC TTCCCAGATT CTGTCAGGCA TCATTCGCAA TGGATCGGCA ACTTCCCCGA GCGGATTGGA GCGTCCGGGA GTAGCGTCGC AAACACGCGG GCCCGGGTGC AAGTGGTGGA CCTGCAACGC TACATTTCCA TCATCGCCGA CAAAAAGCTT CCCGCCGCGG AACGCGAGCA GGCCGTGGAA ATGGCCGTGA GCCTGTTCGG AAAGGATTAT ATGCAAAACG GCAAACGGCG ATCGCCTCAG GTGCAGGTGG CGCGCAGGGA CGGCACCACA TTCGGTGTCC CGGTCAAGAT TTATTTCAAA AATCTCCTGT ATGTCAAATT CGACAAGGTG GAAATTACCT CCTATGACGC CGCGACAAAG GCCGGGCTGA AAACGATTAC CGTCGATGAC ACCGTGCCGA TTGCAGGTTT CCGGTAG
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Protein sequence | MQGLTKIINH FTRRAGACWL TAALLLTGPL CPGQSFYAVL VADTRDPAIG SGCQKDLEEM SGTLRSISKK IEYNYREIVC DQEKFGKAGI QAAISNIECK PEDIIFFYYT GHGISNDADS SRFPVLYLKD ENLELEIIHG LLRDKNPRFC LTFGDCCNNL VTGPTPPATR GITVTKDTEM LRQLFVQANG DLLISSAKKG EKATAHPREG SFYSNHWMQA LAYAGSKDKQ ASWEKLLADA ENRLQESLKN FPDSVRHHSQ WIGNFPERIG ASGSSVANTR ARVQVVDLQR YISIIADKKL PAAEREQAVE MAVSLFGKDY MQNGKRRSPQ VQVARRDGTT FGVPVKIYFK NLLYVKFDKV EITSYDAATK AGLKTITVDD TVPIAGFR
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