| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0566 |
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| Symbol | |
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| ID | 8224135 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 642195 |
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| End bp | 643433 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 644928442 |
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| Product | putative RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003084996 |
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| Protein GI | 255034375 |
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| COG category | [K] Transcription |
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| COG ID | [COG4941] Predicted RNA polymerase sigma factor containing a TPR repeat domain |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.339503 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCTCTA ACCCTGGAAC ACTGCACAGT CTTTTCAGAA AGGAGTTCAC CCGGATGACG
GCGGTAATCT GCCGTCATTT CGGACTGAGG CACATTCAAA TTGCGGAGGA CATTGCCAGT
GACGCTTTTC TGACAGCTGC GGAAATCTGG CCGAAGGAAG GGCAGCCCGA TAATCCTACG
GCATGGCTCT ATGCCGTAGC CAGAAATAAA GCGAAAGATC ATCTCAAACA TATCCGCGTC
TTCGAAACGC AGGTCTCACC CGCCCTCCTC CGCGAAAGTG TGCAGCCGGA ACCGGATTTC
GAATTCACGG CGGAAACCAT CGCAGACAGT CAGTTGGCGA TGCTTTTCGC CGTTTGCAAC
CCGGCCAACG CTCCGCAGGC GCAGATCAGT CTGGCGTTGC AGGTCCTGTG CGGTTTCACG
GTTGCCGAGA TCGCCGACGC ATTTCTCTCC AAACCGGAAA CCATTAAAAA GCGGCTCCTG
CGGGCACGCG CCAGGCTGCG CGAAGACAAC TTCCGCATGG GCTCGCTGCA CCCGGCCGAT
GTACAGTCCC GGCTGGATTC GGTTTTGCGC ACGCTGTATT TGCTGTTTAA TGAAGGTTAT
TTTTCCAAAT CGGGCAACCA TCTCATTCGC GAGGACCTAT GCGCAGAAGC TATGCGTCTT
GCACTCCTGC TTACTGAAAA TCCATTCGTC AATTCACGCC ACGCAGATGC GTTGCTGGCG
CTGATGTGCT ACCAGAGTTC GCGGTTCGAT GCGCGGCTGA ATGGCGACGG GCAAACGGTG
CTTTTCGAAG CGCAGGACCA AAGTCAGTGG GACCGCGCGC TGATCGACCG GGGCAATTAT
TATCTCGTTA ATGCGTGCAG CGGGGAAACC ATATCGAAAT ACCACATCGA AGCAGGCATC
GCCTATTGGC ATACCACACC CGAAAACACC GCCAAATGGC CGCATATCCT GCATTTGTAC
AACCAATTGA TTATCGTCGA GTACTCTCCC ACAACCGCAC TCAATCGCAC GTTCGCTTTC
GCGAAAGTGC ACGGCAACGA GGCCGGGTTG CAGGAAGCGA AGAAGCTGAG CCTGGAAGAC
CATACCCCCT ACCACGCCCT GCTGGGCTAT CTGTACGCGC CGCTTTCGCC TGAGATGAGC
GCATTACACT ACAAACGGGC GATCGGTCTC TCGAAATCGC CCGCCGAAAT ACGGACGCTT
CGCCGCGCAT GCGACGACCT GGCAATTAAC TGTCCGTAA
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| Protein sequence | MVSNPGTLHS LFRKEFTRMT AVICRHFGLR HIQIAEDIAS DAFLTAAEIW PKEGQPDNPT
AWLYAVARNK AKDHLKHIRV FETQVSPALL RESVQPEPDF EFTAETIADS QLAMLFAVCN
PANAPQAQIS LALQVLCGFT VAEIADAFLS KPETIKKRLL RARARLREDN FRMGSLHPAD
VQSRLDSVLR TLYLLFNEGY FSKSGNHLIR EDLCAEAMRL ALLLTENPFV NSRHADALLA
LMCYQSSRFD ARLNGDGQTV LFEAQDQSQW DRALIDRGNY YLVNACSGET ISKYHIEAGI
AYWHTTPENT AKWPHILHLY NQLIIVEYSP TTALNRTFAF AKVHGNEAGL QEAKKLSLED
HTPYHALLGY LYAPLSPEMS ALHYKRAIGL SKSPAEIRTL RRACDDLAIN CP
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