| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0535 |
|---|
| Symbol | |
|---|
| ID | 8224102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | - |
|---|
| Start bp | 596105 |
|---|
| End bp | 599116 |
|---|
| Gene Length | 3012 bp |
|---|
| Protein Length | 1003 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644928409 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003084965 |
|---|
| Protein GI | 255034344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.525327 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAATCT TTTACACAAC GCGTGGCTTT TTGCTAAAAA AGCTCACCAA CTTCATTCTC
TTCTTCATCA TCTTTACATG CGTATCATTA TCATTTGCGA ATGCTCAATC ATGTCCTGAT
CCCGGAGGAG GAACTTTATG GTATCGTTTT AATGAAAGCC AGAATGTGAA TTTTTTTCCT
GAGAATGTTC CGGCTGGAAA GACTGGCGAC GGAAAGGCAA CATCAGGCAA ATTGTCACTC
ACCGAGACGA TGAATGCCGT TTATCCCCTT CGTGCGGCCA CAATAAATCC GGAACTGTCC
GATGGAACAA CAGGCAAAGT TGTGCTCCGG TTTGACTTTC TGGACATGGC CCCCGCCGCG
ATTATCAAGA TTTATCAGGG CACCTCTGCA ACGGGGACAC CCGCCGAAAC CATAACATCG
GCAAACGCTT CGGGTTATTT GTTGCAAACC CGTACTTATA CAGGCTCTGT TACTGTGACA
TTTGAAAGTC CTGTCGCCTC TGCCGGAGGG GACTTTAAAA TCTTTATCCC GTATACAACC
GGGGATCAGA CAGCAACGTC GGCATTTGGT TTTCAGGTAG CTTACTGGAA AAAGTTTATC
ACTTCCAACT CGTATACTGT GATGGACTCC TATCCCGAGG AGGCGGCACC CATTGCTACT
GCCTATTTTG ATGCGAATAA GAACCTTGTT TCTTCGGAAC TCTCTTTTTG TATTGACTAC
GGGAAACCCT CGCCTTCTAT GGCGAACAGC AATTATATAG GAGAGGTCGT TTTTTTTCCG
CAGGCTCGCC CGGACCTGGA TAAATCCGGA ACTGCAGACG GGGCGGATCA ATTAAAGGCA
GCCCGCCTGG TGTATATCAT GAAAAACGTT GCCACACCGG CAACGACTTA TCAAAACTTC
ATGGATGTAC AGGGGGCGGT GAATACTACG TTAGGGCCTG ACTATACGAT TCACTACGCG
GGTCTTCATG GAGATGCAAT CGACGCTATT CCCAGTCTGC CAAGCCCGGC TGAGCCAGTG
TTCTCAATTA CTGGTCCGGC GTCGGCAGTG CCGGCGGGGA CACCTCAAAA CTTTACTGTT
AATCTGACAG ACGACGGTGG ACATCCGAGA ATTTTTAAGT TAAAGCTCCC CAACGGCATA
ACCCTGAACT CGGCAACAGG GGCGACCTAT AATCCAAGTG ACAGTACCCT TGCGTTTGCT
TCATCGCCCG CCTCCGCGAC AGTGTCCGTT ACCAGTGCTA CAAGTACCAC GGCTAAGTTA
CGGGTTGTGT ACAATCAACC AGGTTTTTGG AATGTGAACA ATCTCATTGT ATATGAACCC
TGTACAGGTT TGGACGATTT TCAGGGATTT ATTGGGTTAA GCAAGGGTGA TATTACATAT
CCCTTTCGGG AAGCTTCCGC AACCTGGGCT GCTCAGCCCG CTTTCCCATG CTCGGAACTG
AGCTATGTGA TCGGTAACCG GAACATCGGC GGTTCCAACG TTTCGGATGG TTATACACTC
GACCTTTCGA GTGGTGTTAC AACTCTGGCC AAACAGACCT TGATCGAAGG CCCTAATGCT
TTCATTAATG CTATCGGCTA CAACACCGTC GATAACTACA TCTGGGGTTT CCGTTACGGC
ACCAATCAGC TCGTGCGGAT CGGCAGTGAC TGGTCGGTGA CATTCCATGA TGTGACCGGC
TTTCCGGTAC CGGTTCCGGG TTTTGCAACC GGAGATGTCA GCCCGGATGG CATTCTGTAT
TTGTATGCCT CCAATTCCAA CCAGATCACA AAGGTCGACC TGAATCCCGG TTCAGCAAAT
TACCTGACTG CCGTAACGCT GCCCACTTCG CCAACCGACT TGAACGACTG GTCGTTTAAC
CCGACCAATG GCATGCTTTA TGGATTTGGA ACAAGCAAAG TACTATATCA GTTTGATCCG
GTAACCGGCA ACCGAACTAC ATTGGGCTCA GTAACCGGCG CAGGCATTGA AACCTCTGCC
TACACAGGCG CTTTTGGAAC TGCATTCTTT GATACCGATG GCGATATGTA TGTGGGCAAT
AACGGCAGCG GGGCCATTTT CAAGATCAGC GCGCCGCTTA AAAATCTTAC AGCCACCCTG
TTTTCGACAG CTTCCGGCGT TACTCCGGGT GACGGTGCGC GGTGCCCAAG CGCCATCGTA
ACGGATCCGC CAGTAGCTGT GGACGACAAC GGTACCATTA CTTGCAACGC CGCTACTGTT
GACGTGCTGG CCAATGATAT CGCAGGTAGT GCGCCGCTGG TCCCTGCCAG TGTAAAACTG
TTGACGCCAG GCACGCTTGC CCGGGTGACG ACCCTGACTG TCACTGACCA GGGCGAATAT
AATGTGAATA CCGTGACGGG TGCGATCACA TTTACTCCGG TCAATGGCCT GCGCGACACC
ATATCTATCG ATTACGTGGT AACCGATGGC AATGGCCTCG AATCGATTGC CACATTAACC
ATCATTGTCG ATTGCCCTAT GCCTGTAACG CTGGTCGCCT TTGATGCCAG GAAAGAGGGG
AATTCTGCAC TATTGACCTG GTCTACCACG GAAGAAGTGA ATTCCGACCG CTTTGAAATA
GAACGTAGCC GCAACGGGAA GGTCTGGGTT AAAATCGGAA GTGTCCGGTC AAACGGGGAA
AGCAGTATTA CGAGAAATTA CGCCTACACC GACAATACAG TGGAAAAAGG TGAAAATCTA
TATCGCCTGA GAATGGTCGA TCTGGATGGC ACATATGCTT TTAGCGCTAT CAGAACGGTG
TCTGTTGAAA ATGGTACGGG GCAAATTTCT GTCTACCCTA ATCCGGTTGC GAGTGGTAGA
TTGACTATCG ATGTACCGGG CGCGGAGCGG TATCGGGCTG AAATAACTAC GCTGGCAGGG
AGTTCGGTGC TGCAACAGAG CCTGGCTAAA AGCCGGGAAT TGAACCTACA TGGACTTTCG
TCGGGTATGT ATGTGCTACG CGTCATCTCA ACAGACGGCG ACGTACAAAC CAAGGTGTTT
GTTGTGAAGT AA
|
|---|
| Protein sequence | MSIFYTTRGF LLKKLTNFIL FFIIFTCVSL SFANAQSCPD PGGGTLWYRF NESQNVNFFP
ENVPAGKTGD GKATSGKLSL TETMNAVYPL RAATINPELS DGTTGKVVLR FDFLDMAPAA
IIKIYQGTSA TGTPAETITS ANASGYLLQT RTYTGSVTVT FESPVASAGG DFKIFIPYTT
GDQTATSAFG FQVAYWKKFI TSNSYTVMDS YPEEAAPIAT AYFDANKNLV SSELSFCIDY
GKPSPSMANS NYIGEVVFFP QARPDLDKSG TADGADQLKA ARLVYIMKNV ATPATTYQNF
MDVQGAVNTT LGPDYTIHYA GLHGDAIDAI PSLPSPAEPV FSITGPASAV PAGTPQNFTV
NLTDDGGHPR IFKLKLPNGI TLNSATGATY NPSDSTLAFA SSPASATVSV TSATSTTAKL
RVVYNQPGFW NVNNLIVYEP CTGLDDFQGF IGLSKGDITY PFREASATWA AQPAFPCSEL
SYVIGNRNIG GSNVSDGYTL DLSSGVTTLA KQTLIEGPNA FINAIGYNTV DNYIWGFRYG
TNQLVRIGSD WSVTFHDVTG FPVPVPGFAT GDVSPDGILY LYASNSNQIT KVDLNPGSAN
YLTAVTLPTS PTDLNDWSFN PTNGMLYGFG TSKVLYQFDP VTGNRTTLGS VTGAGIETSA
YTGAFGTAFF DTDGDMYVGN NGSGAIFKIS APLKNLTATL FSTASGVTPG DGARCPSAIV
TDPPVAVDDN GTITCNAATV DVLANDIAGS APLVPASVKL LTPGTLARVT TLTVTDQGEY
NVNTVTGAIT FTPVNGLRDT ISIDYVVTDG NGLESIATLT IIVDCPMPVT LVAFDARKEG
NSALLTWSTT EEVNSDRFEI ERSRNGKVWV KIGSVRSNGE SSITRNYAYT DNTVEKGENL
YRLRMVDLDG TYAFSAIRTV SVENGTGQIS VYPNPVASGR LTIDVPGAER YRAEITTLAG
SSVLQQSLAK SRELNLHGLS SGMYVLRVIS TDGDVQTKVF VVK
|
|---|
| |