| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0481 |
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| Symbol | |
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| ID | 8224048 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 540941 |
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| End bp | 542476 |
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| Gene Length | 1536 bp |
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| Protein Length | 511 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 644928359 |
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| Product | selenocysteine synthase (seryl-tRNASer selenium transferase)-like protein |
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| Protein accession | YP_003084915 |
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| Protein GI | 255034294 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.11487 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAGCCGG GACCGCAAAT CTATCAGTCG ATCGGTGTGG AACCGATTAT CAATTGCCGG
GGGACATTCA CCATTATCGG AGCGTCGATC GAATTGCCGG AGGTGCGCGA AGCGATGGAA
TATGCCTGCC AATATAATGT ACAGATCGAC GAGCTGGCCT TCGGCGTAGG CCAGCGCCTG
GCCGAGATCA CCGGTGCCGA ATGGGGCATG GTGTCTTCTG GCTGCGCTGC GGGCATGAAC
GAGGTCACGG CAGGCATTAT AGCGGGCGGT AACCCCGAAA AACTGATCCG CATTCCTAAC
CTGGAAGGTT TTGAGAAAAC GGAGGTGATT ATCCCGCGCT CATCGCGCAA CGTATATGAC
CACGCGATCC GTAATATCGG CGTTAAAATC ATTACCATAG AAACGATCGA GGAATTGAAA
AAAGCGATCA CACCGCGCAC GGCGATGATT TACATGATGC CCGGCGAAGA GCCGTGGAGC
GTCAAAAGTG TGGCCGATAT CGCCAAACCG GCAGGTGTAC CTCTGCTCGT GGATGCCGCG
GCGGAGCGCC TCACGATTCC GAACATTCAC CTGGCAGCCG GTGCAAGCGT GGTGGCTTAC
AGTGGCGGAA AGGTCATCCG CGGGCCGCAA TGCGCAGGAC TTTTGCTGGG CAGTAAAGAT
GTACTTATGT CGGCATGGCA GGCCAGCGCG CCGCACCACG GCCCCTGCCG GAACAATAAA
GTAGGTCGCG AGGAAATGAT AGGCATGCTC GCCGCCGTGG AAGCATGGGC CACCCGCGAC
CATAAGGCGG AGATGAAAAT GTGGGTTTCG TGGCTGAATA CCATTTCGGG CAAACTGAAT
GGCATCCCAA GCGTGCAGCT GGACGTTCGT GAGCCGAAAG AAGGCGCACT GGACAATGCC
ACACCAACGC TCACCGTCAC CTGGGACCCC ACCAAACTGA ACATTACCGG CCAGGAAGTA
GCCGACGAGC TGCAAACCAC CAAGCCGCGC GTGGCGGTTG GAACCGGCTA TCGCAGAGGC
CAGGCTGCGG CGCAATCCGG CCCGCCTACG ACGTCCATTA CCGTTGCGGC GTACATGATG
GGCCCCGGCA ACGACAAAAT CGTGGCCGAG CGCATCCGCG AAATCCTTAC CCGCAAGCGC
AGCGCGCCCA AAGCCGAAAC GGCCATGAAA GCGCCCACCG CCCAGATCGC GGGCCGCTGG
GATGTGGACA TCGAGTTTTA TACCAGCACC AGCAAGCATA CTTTCATCAT CGAGCGGCAG
GATGGAAACT ACCTTTACGG AACCCACAAG GGCGAATTCG CGACGCGCGA GCTGTTCGGC
AATATCGACG GCGACGACGT GCGCTTCCAG AGCCGTTACA GCGCGCCGGG CGACAATGTG
GTGATGACAT TCCACGGGAA GCTCAGCGGC GAAACCATTA CCGGCGAAAT CGACATGGTG
GAGTATATCA ATGCGAAGTT CACGGCTAAG AAAGCGACCT TCCCCAGCAA CCGCCAGCGG
ATCAACATTC CTGCGGGACG GCCATTGTCG ACCTAG
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| Protein sequence | MKPGPQIYQS IGVEPIINCR GTFTIIGASI ELPEVREAME YACQYNVQID ELAFGVGQRL
AEITGAEWGM VSSGCAAGMN EVTAGIIAGG NPEKLIRIPN LEGFEKTEVI IPRSSRNVYD
HAIRNIGVKI ITIETIEELK KAITPRTAMI YMMPGEEPWS VKSVADIAKP AGVPLLVDAA
AERLTIPNIH LAAGASVVAY SGGKVIRGPQ CAGLLLGSKD VLMSAWQASA PHHGPCRNNK
VGREEMIGML AAVEAWATRD HKAEMKMWVS WLNTISGKLN GIPSVQLDVR EPKEGALDNA
TPTLTVTWDP TKLNITGQEV ADELQTTKPR VAVGTGYRRG QAAAQSGPPT TSITVAAYMM
GPGNDKIVAE RIREILTRKR SAPKAETAMK APTAQIAGRW DVDIEFYTST SKHTFIIERQ
DGNYLYGTHK GEFATRELFG NIDGDDVRFQ SRYSAPGDNV VMTFHGKLSG ETITGEIDMV
EYINAKFTAK KATFPSNRQR INIPAGRPLS T
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