| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0419 |
|---|
| Symbol | |
|---|
| ID | 8223985 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 480928 |
|---|
| End bp | 481941 |
|---|
| Gene Length | 1014 bp |
|---|
| Protein Length | 337 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 52% |
|---|
| IMG OID | 644928296 |
|---|
| Product | D-isomer specific 2-hydroxyacid dehydrogenase NAD-binding |
|---|
| Protein accession | YP_003084853 |
|---|
| Protein GI | 255034232 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.693243 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGTGGT ATGTGTTCTG CTGCGTAATT CTGTATTACT TTTGCCGGAC GGTTCAACCG
GCAAGTTACA AAAAATCCCG TGCTACTATG AAAATCCTGA TCGCAGACTC CATGCATCCG
TCATTATTCG AGATGCTGGA AGCGCAAAAA TGGGACTATG ATTACCATCC TCAATACAAA
AGAGAAGACA TAAAGAATGC ATTGCCTGCC TACGACGGGC TCATGATCCG CAGCAAGACT
TTCCTGGACC GGGAAATGCT CGAAAACGCG AAAAACCTCC GTTTTATCGC GCGGGCCGGC
GCAGGCCTCG ACCTGATCGA CCTGAATGTG GCCAGGGAGT TGAACATTGA AGTCTTCCAC
GCCGGCACAG GCAACCGCGA TGCCGTGGCG GAACATGCGC TCGGCATGCT GCTGGCATTG
TTCACCAACA TTTTACGCGC CGACCAGCAG GTTAGAAACG GCATCTGGGA CCGCGAGGGT
AACAGGGGCG TGGAGCTCAT GGGCAAAACA GTGGGCCTGA TCGGCTACGG GAACAATGGC
TCGGCTACCG CGAAGAGGCT CAGCGGCTTT GGCTGCAAAG TACTTGCGTA TGACAAGTAC
CGTGATCAGT ACGGCGATGC GTTTGCGGCA GAATCGTCGA TTGAAGAAAT CCAGCGCGAG
GCCGACATTA TCAGCCTGCA TATCCCGCTG ACCGACATTA CCCGCCAACT CGTGAACGAT
GAATTCATCA GCGCATTTGC CAAGCCGTTC TATTTATTGA ATTTATCCAG AGGCGAAGTG
GTGCAATTAA AAGCAGTGAC CAGTGCGCTG GAAAGCGGAA AAATCAAAGG TGCTTGCCTG
GATGTGCTCG AAAATGAAAA GATCGGGAAG TTGACGCCGG AGCAGCAGGA GGTATTTGAT
TATCTGAAAT CGTCGGACCG CGTTGTGCTT ACACCGCACA TTGCAGGCTG GACACATGAA
AGTTACGTCC GGATCAATGA AGTACTGGTT GAACAAATCC GGAACTGGCT ATAA
|
|---|
| Protein sequence | MLWYVFCCVI LYYFCRTVQP ASYKKSRATM KILIADSMHP SLFEMLEAQK WDYDYHPQYK
REDIKNALPA YDGLMIRSKT FLDREMLENA KNLRFIARAG AGLDLIDLNV ARELNIEVFH
AGTGNRDAVA EHALGMLLAL FTNILRADQQ VRNGIWDREG NRGVELMGKT VGLIGYGNNG
SATAKRLSGF GCKVLAYDKY RDQYGDAFAA ESSIEEIQRE ADIISLHIPL TDITRQLVND
EFISAFAKPF YLLNLSRGEV VQLKAVTSAL ESGKIKGACL DVLENEKIGK LTPEQQEVFD
YLKSSDRVVL TPHIAGWTHE SYVRINEVLV EQIRNWL
|
|---|
| |