Gene Dfer_0267 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0267 
Symbol 
ID8223833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp303766 
End bp304929 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content57% 
IMG OID644928146 
Productoxidoreductase domain protein 
Protein accessionYP_003084703 
Protein GI255034082 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.1725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.109998 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAGACC AACAGGACAA TCGCCGTGAC TTCCTGCGCA ATTCGCTTTA TTCCGCCGCC 
GGCCTGGCGA TGTTCCCGCA ACTGACCCCG AATGCCTACG GTTCCGTCAA AACCGTGGTG
GCCGGCGGGC CAACTGCTAC CGTCATGCCT CCGCGTATCA AGTTTGCGGT GATCGGCATG
AACCACGGGC ATATTTACGG GCAGGTGGAA GCAGTAACGC GTGGCGGCGG CGAGCTGGTG
TCATTCTTTG CCAAGGAAGC GGACCTCACG GCGGCTTTTG CCAAGCGCTA TCCGAATGCG
AAGCAGGCGA AATCCGAAGC CGAGATCCTG GAAGATAAAT CCATTCAGCT CGTACTCAGC
TCGGCCATCC CCGACGAGCG CGGGCCGCTC GGCGTGCGCG TAATGAAGGC CGGAAAGGAC
TACATGGTGG ATAAGCCGGG CCTTACCACG CTGGAACAAC TCGCCGAAGT GCGCAAAGTG
CAGAAGGAAA CCAAGCGCAT TTACTCGATC ATGTACAGCG AGCGCCTCGA AAACCGGGCG
ACCGTGAAAG CTGGCGAGCT CATTAAAGAA GGCATTATCG GGAAGGTCGT CCAAACGATC
GGCCTGGGCC CGCACCGGAT GAATGCGAAC ACCCGTCCCG AGTGGTTTTT CGACAAAAAG
CGCTTTGGCG GCATTATCTG CGACATTGCT TCCCACCAGT TCGACCAGTT CCTGTTTTTT
ACCAATTCTA CCAAAGCGCA GGTGATCGCC TCGCAGGTGG GCAATGTGAA CCACCCTCAA
TACCCCAAAT TCGAGGATTT TGGTGACGCC ATGCTGCGGG GTAACGGCGG CGCGGGCTAC
ATCCGCGTGG ACTGGTTCAC ACCCGACGGC CTGAAAACCT GGGGCGACGG GCGACTCACC
GTACTGGGTA CCGAAGGCTA CATCGAGATC CGCAAGAATA TCGATATCGG TGGCCGCGAG
GGTGGAAACC ACCTTTTTGT GGTTAATAAT AAAGAAACGA TGTACGTCGA TTGTACCAAA
GTGGAACTGC CTTACGGCCG CCAGCTGGTA GACGACGTGC TGAACCGCAC CGAAACGGCC
ATGTCGCAGG AGCATTGTTT CCTGGCGACG GAATTGTGCC TCAAAGCGCA GAAAAACGCG
CAGAATGTTT CGGTGGTGAG CTGA
 
Protein sequence
MRDQQDNRRD FLRNSLYSAA GLAMFPQLTP NAYGSVKTVV AGGPTATVMP PRIKFAVIGM 
NHGHIYGQVE AVTRGGGELV SFFAKEADLT AAFAKRYPNA KQAKSEAEIL EDKSIQLVLS
SAIPDERGPL GVRVMKAGKD YMVDKPGLTT LEQLAEVRKV QKETKRIYSI MYSERLENRA
TVKAGELIKE GIIGKVVQTI GLGPHRMNAN TRPEWFFDKK RFGGIICDIA SHQFDQFLFF
TNSTKAQVIA SQVGNVNHPQ YPKFEDFGDA MLRGNGGAGY IRVDWFTPDG LKTWGDGRLT
VLGTEGYIEI RKNIDIGGRE GGNHLFVVNN KETMYVDCTK VELPYGRQLV DDVLNRTETA
MSQEHCFLAT ELCLKAQKNA QNVSVVS