Gene Dfer_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0174 
Symbol 
ID8223740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp201070 
End bp201936 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content56% 
IMG OID644928053 
Productglycosyl transferase family 2 
Protein accessionYP_003084610 
Protein GI255033989 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTAT TGGGTTTACC TAAATGGATC TTGCCGCACC TTTTTACAAA CAAGCGATTC 
GAAGACCTCA CGGAAGCCGA GATTCAGGCG CTGCGGGAAC GGATCAGCCG TTTTAAGCAC
GAAACCCCCG ACGTGTCGGT GGTAATCCCC GCCTGGAACG AAGAAAATAA TATTTACCGG
ACGCTCTCGT CGCTTTCCGC CAGCCGCACC CGGTATAATG TAGAGATCGT GGTGGTGAAC
AACAATTCCA CCGACGGCAC ACAGAATGTG CTCGACAAGC TCGGGGTGCG CAATTACCTG
CAAACCGTGC AGGGAACGCC CTTCGCCCGC CAGATGGGCC TCGATAATGC CCGCGGCAAG
TTCCACCTCT GCGCCGATTC CGATACTTTT TACCCACCCG ACTGGATCGA CCTCATGGTG
GAGCCCATGG CCAAAAACGC GCGCGTTACC GGCGTTTACG GGAATTACGC ATTCATCCCG
CCCGACGGCC AGGGACGGCT CGGGCTGTGG TTTTACGAAA AATTTGCGGG CCTGATGATC
CAGATACGCA AGAAAAACCG CGAGTACCTC AATGTCTACG GCTTCAACAT GGGCTTCGTG
ACGGAAGTGG GGCGCCGCAC GGGCGGTTTC AAAGTCAGCG GCCAGCGCAT TTATGCCAAC
ATCGTCGGCA GCGATTTCCA GAACGAGGCG GAAGATGGCC GGATGGCCCT CAACCTCAAA
AAAGAAGGTG ACCTGCAACA GGTAACCAGC TCCAAAGCAA CGGTTTTCAC CTCGCCCCGC
CGCCTGCTCG ACGACGGCAG CATTTCCAAA GCCTTCTTCA ACCGGGCCAA ACGCCAGTTG
CAGGGCATGC GCGACTATCT TTCGTAA
 
Protein sequence
MSLLGLPKWI LPHLFTNKRF EDLTEAEIQA LRERISRFKH ETPDVSVVIP AWNEENNIYR 
TLSSLSASRT RYNVEIVVVN NNSTDGTQNV LDKLGVRNYL QTVQGTPFAR QMGLDNARGK
FHLCADSDTF YPPDWIDLMV EPMAKNARVT GVYGNYAFIP PDGQGRLGLW FYEKFAGLMI
QIRKKNREYL NVYGFNMGFV TEVGRRTGGF KVSGQRIYAN IVGSDFQNEA EDGRMALNLK
KEGDLQQVTS SKATVFTSPR RLLDDGSISK AFFNRAKRQL QGMRDYLS