| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0161 |
|---|
| Symbol | |
|---|
| ID | 8223727 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dyadobacter fermentans DSM 18053 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013037 |
|---|
| Strand | + |
|---|
| Start bp | 186696 |
|---|
| End bp | 187085 |
|---|
| Gene Length | 390 bp |
|---|
| Protein Length | 129 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644928040 |
|---|
| Product | response regulator receiver protein |
|---|
| Protein accession | YP_003084597 |
|---|
| Protein GI | 255033976 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 0.433786 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACAATA GAAAGAATCT GTTGATTATA GACGACGAAC CTAGTATTAC CAAAATACTG
GAACATTTTC TGAAAAAGGA TTTCAACGTA GTGATCAAAA ATGATGGCTC GGAAGGAATG
CTGTGGCTCG AAGAAGGCAA CCAGGCCGAC CTCATTATCG CCGACCTGCA CATGCCCAAC
CTGAGCGGCA AGGAGTTTCT GAAAGTGGCC AAAGCCAGTA ACCTCTATTC CGAAATACCG
ATTATCATTC TGTCGGGTTC TGACGAGAGC AGCGAGCGCA TTCAGTGCCT TAATCTGGGT
GCCGACGATT TCATGGTCAA GCCGTTCAAC CCGATGGAGG TGCACGCGAA GATCAATGCC
GTACTGCGGC GCAGCAAACG CTACTCTTAA
|
|---|
| Protein sequence | MDNRKNLLII DDEPSITKIL EHFLKKDFNV VIKNDGSEGM LWLEEGNQAD LIIADLHMPN
LSGKEFLKVA KASNLYSEIP IIILSGSDES SERIQCLNLG ADDFMVKPFN PMEVHAKINA
VLRRSKRYS
|
|---|
| |