| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dfer_0153 |
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| Symbol | |
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| ID | 8223719 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dyadobacter fermentans DSM 18053 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013037 |
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| Strand | - |
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| Start bp | 174424 |
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| End bp | 176382 |
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| Gene Length | 1959 bp |
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| Protein Length | 652 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 644928032 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_003084589 |
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| Protein GI | 255033968 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.89451 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGGGC TGGATGGCAG AAAACGAGTA GTTATCAGTA ATGTAAGGCC GCAGGTCGAG
GACGGCAGGT TCACGGCCAG GCGGGCAATC GGTGAAAGCG TCGGATTTTC TGCGGACATT
ATTGCCGACG GCCACGACGC CGTGGCGGCA AGCGTGATCT TTCGCCACGA ATCGGATCAA
ATGTGGCACG ATGTGCCGCT GGCGCATGCC GGCAACGATC ACTGGCAGGC AACCTGGACG
CCCGATCGGG AAGGTTTTTA CGAATACCGG TTCACAGGCT GGGTCGATCA TTTCACGACC
TGGAAAAAAG GCTTGCTCAA AAAGTTTGAT GCTAACCAGG ACATTGCCGT AGAACTGAGG
ATCGGGGCGG ATATCCTGAA AGAAGCGGCC GGCCTCGCAC CGCAAACCGA CCAGGCGGCA
TTTGAACAAT GGATCAATGC GTTGGAAAAT GCATCCGATC CGCAGGAAGC GGTGGATATG
GTAGTGGGCG ATGACCTTGC CGAAGCCATG TCGAAAATCC GGTACACGGA CCGCATCAGC
GTTTTTGACC AAACATTCCG GCTCGAAATC GAACGTAAAA AGGCCGGTTT CAGCTCCTGG
TATGAACTAT TCCCCCGCTC GGCCTCCGAG CTGCCCGGCA CACACGGCAC ATTCCGCGAT
GTGCTGAGGC TGCTACCCAA AGTCGCCAAA ATGGGCTTTG ACACCCTGTA CTTCCCGCCT
ATTCATCCGA TCGGCGAAAT GAAGCGGAAG GGCAAAAACA ATTCCCTCGT ACCATCCGCC
ACCGACCCGG GCTCGCCCTG GGCGATCGGG AACCGGCTGG GCGGGCATAA GGCCGTCCAC
CCGGAACTGG GCACGATCGA AGATTTTGCG GAACTGGTAA CCAAAGCAAA GGAGCTGGGC
ATTGAAGTAG CGATGGACAT TGCCTATCAG TGTGCGCCCG ACCATCCGTA TGTGAAAGAA
CATCCGCAAT GGTTCAAATG GCGCCCCGAC GGCACCGTAC AATATGCCGA AAACCCGCCC
AAAAAGTACG AAGACATTCT TCCTTTCGAT TTTGAAACGC AGGATTGGCA AAACCTTTGG
CACGAACTCA AAAGCGTGAT CGATTTCTGG ATCGGGCATG GCGTGAATGT GTTCCGGATC
GATAACCCGC ATACCAAGGC GTTCCCGTTT TGGGAATGGA TCATCGCAGA GGTGCGGAAA
GTGCATCCGC AGGTGATTTT CCTCGCAGAG GCATTCACGC GTCCGCGTGT GATGGAGCGC
CTCGCGAAAA TCGGTTTCAA TCAGTCCTAC ACCTATTTCA CGTGGCGTAA CAGCAAATGG
GAGCTGGAAC AATACCTGTA CGAGCTCACC AAAACTGACC AGCAATATTA TTTCCGGCCT
AATTTCTGGC CCAATACGCC CGATATTCTC CCGCATCACC TCGTGGAAGG CGGCGAGAAT
GCGCACATCA TCCGCTTCAT CCTGGCCGCG ACACTATCCT CCAACTACGG ATTGTACGGC
CCCGTGTATG AATACGGCGT GAACACGCCC CATCCCGGAA AGGAAGAATA TACCAACAAC
GAAAAGTACG AGATCAAGCA TTGGGACTGG GACCGTTACA GCCGCACCCG TGAGATCATT
ACCCGCGTGA ACCGCGTGAG AAAGGCTTAC GCAGCGCTGC AATCGACCTG GAATATTCAT
TTTAATGAAA CTAACAATGA CCAGGTGATC AGCTACACCA AGCTGGCGCC GGAACGCGGC
GAGTCGCTGC TGGTCGCGGT TAATCTCGAC CATAATCATA CACAGGGAGC ACACATAAAA
GTGCCGCTGC ACGAGCTGGG GATCGGCTAT GACCAGCCCT ATGTCGTCAG CGACATGCTC
AGCGGGGAAA AATACAGATG GCAGGGGGAA TACAATTATG TGCAAATGAA TCCCTGGGAA
ATGCCGGCAC ACATTCTAAA AGTTGAACGA TTGAATTGA
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| Protein sequence | MSGLDGRKRV VISNVRPQVE DGRFTARRAI GESVGFSADI IADGHDAVAA SVIFRHESDQ
MWHDVPLAHA GNDHWQATWT PDREGFYEYR FTGWVDHFTT WKKGLLKKFD ANQDIAVELR
IGADILKEAA GLAPQTDQAA FEQWINALEN ASDPQEAVDM VVGDDLAEAM SKIRYTDRIS
VFDQTFRLEI ERKKAGFSSW YELFPRSASE LPGTHGTFRD VLRLLPKVAK MGFDTLYFPP
IHPIGEMKRK GKNNSLVPSA TDPGSPWAIG NRLGGHKAVH PELGTIEDFA ELVTKAKELG
IEVAMDIAYQ CAPDHPYVKE HPQWFKWRPD GTVQYAENPP KKYEDILPFD FETQDWQNLW
HELKSVIDFW IGHGVNVFRI DNPHTKAFPF WEWIIAEVRK VHPQVIFLAE AFTRPRVMER
LAKIGFNQSY TYFTWRNSKW ELEQYLYELT KTDQQYYFRP NFWPNTPDIL PHHLVEGGEN
AHIIRFILAA TLSSNYGLYG PVYEYGVNTP HPGKEEYTNN EKYEIKHWDW DRYSRTREII
TRVNRVRKAY AALQSTWNIH FNETNNDQVI SYTKLAPERG ESLLVAVNLD HNHTQGAHIK
VPLHELGIGY DQPYVVSDML SGEKYRWQGE YNYVQMNPWE MPAHILKVER LN
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