Gene Dfer_0133 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0133 
Symbol 
ID8223699 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp147743 
End bp148342 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content51% 
IMG OID644928012 
Product2',5' RNA ligase 
Protein accessionYP_003084569 
Protein GI255033948 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.25834 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.433786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAACC TCTGCGCCTA TTCCCTAGCC ATAATGCCGC CATCTACCAT AGCCGAGGAG 
GTTCGCGGTT TCAAACAAAA CCTTCGTGAC GCCATCGGCA AAAGCTACGG CAGCGCCAAT
GCCGACGGCC ACATTTCCCT CGACGGTTTC GACGCCGCCG AAGTTGATTA TCCATTGATC
CTGGCTGAAT ACACAAAGCT AGTCAGTCCA TTAACCCCTT TCGAACTAAC TTTCTCAGGC
TTCGCCGATT TCGACCGCGC CAACTTCTCC GCGTTCTACA TCAAACCAAC CGACGATTCC
AGCAACGCCA TCCGCGAGCG CACGCAGGCG ATTATGAAAG GCTTCGATAA GAAATTCAAA
AAGCAATACA TGCAGAAATG GGCCGACGAG TCCAAAAATC CGCATATGAC CATCGGCCGA
AGGCTTACGC GCGAGTGGGT TGCATTGGCC CATTCGCTTT TTACAGAATA TGAAGCAGGG
TTCCTGTGCG AATCGTTCGC GATCCGGAAG TATAATGAGA AGCGTCGGCA GTATGAAGTG
ATCGATACCA TTCTGCTGTC GGGGCAGAAG ATTGCTGGCG AGCAGATTAG TTTGTTTTAG
 
Protein sequence
MSNLCAYSLA IMPPSTIAEE VRGFKQNLRD AIGKSYGSAN ADGHISLDGF DAAEVDYPLI 
LAEYTKLVSP LTPFELTFSG FADFDRANFS AFYIKPTDDS SNAIRERTQA IMKGFDKKFK
KQYMQKWADE SKNPHMTIGR RLTREWVALA HSLFTEYEAG FLCESFAIRK YNEKRRQYEV
IDTILLSGQK IAGEQISLF