Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dfer_0133 |
Symbol | |
ID | 8223699 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dyadobacter fermentans DSM 18053 |
Kingdom | Bacteria |
Replicon accession | NC_013037 |
Strand | + |
Start bp | 147743 |
End bp | 148342 |
Gene Length | 600 bp |
Protein Length | 199 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 644928012 |
Product | 2',5' RNA ligase |
Protein accession | YP_003084569 |
Protein GI | 255033948 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.25834 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.433786 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAAACC TCTGCGCCTA TTCCCTAGCC ATAATGCCGC CATCTACCAT AGCCGAGGAG GTTCGCGGTT TCAAACAAAA CCTTCGTGAC GCCATCGGCA AAAGCTACGG CAGCGCCAAT GCCGACGGCC ACATTTCCCT CGACGGTTTC GACGCCGCCG AAGTTGATTA TCCATTGATC CTGGCTGAAT ACACAAAGCT AGTCAGTCCA TTAACCCCTT TCGAACTAAC TTTCTCAGGC TTCGCCGATT TCGACCGCGC CAACTTCTCC GCGTTCTACA TCAAACCAAC CGACGATTCC AGCAACGCCA TCCGCGAGCG CACGCAGGCG ATTATGAAAG GCTTCGATAA GAAATTCAAA AAGCAATACA TGCAGAAATG GGCCGACGAG TCCAAAAATC CGCATATGAC CATCGGCCGA AGGCTTACGC GCGAGTGGGT TGCATTGGCC CATTCGCTTT TTACAGAATA TGAAGCAGGG TTCCTGTGCG AATCGTTCGC GATCCGGAAG TATAATGAGA AGCGTCGGCA GTATGAAGTG ATCGATACCA TTCTGCTGTC GGGGCAGAAG ATTGCTGGCG AGCAGATTAG TTTGTTTTAG
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Protein sequence | MSNLCAYSLA IMPPSTIAEE VRGFKQNLRD AIGKSYGSAN ADGHISLDGF DAAEVDYPLI LAEYTKLVSP LTPFELTFSG FADFDRANFS AFYIKPTDDS SNAIRERTQA IMKGFDKKFK KQYMQKWADE SKNPHMTIGR RLTREWVALA HSLFTEYEAG FLCESFAIRK YNEKRRQYEV IDTILLSGQK IAGEQISLF
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