Gene Dfer_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0119 
Symbol 
ID8223685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp133846 
End bp134433 
Gene Length588 bp 
Protein Length195 aa 
Translation table11 
GC content53% 
IMG OID644927998 
ProductCupin 2 conserved barrel domain protein 
Protein accessionYP_003084555 
Protein GI255033934 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value0.338448 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACCC TCACAATGGA AAAAGTATAT CCCGTTACGA TCGACAATGG CCACGGTGAA 
CGACTTACCT TCCTGGGACG CGAAATACGC GACGGTGTCG AGTATATTCA GGTCGAAAAC
CAGGTAAGTC CCGGTGCGGG CCCGCCTATG CATGTGCACC ATCAGCAACA TGAAAGCCTG
CATGTGGTCG AAGGTAAAAT GGGTATTGAA ATACTCGGCG AGCAACCTTA CTTCCTTCAC
AAAGGCGAGT CCGCGACCTT CGAAGCCGGC AGCGCGCACC GTTTCTGGAA CGCCGGCGAT
TCGGTGCTGC ATTGCAAAGG GGAGATCTGG CCGCCGCATA ACATTGAGTA TTTCCTGGGC
GAAATTTACC GTTCGTCGCG GGAGCACGGC AATGGACGTC CGGAAGCGTT TGATGCGGCG
TTTTTGCTAA GTAAATACCG CACGGAGTTT GATATGCTAG GCATTCCGGT GTTCGTAAAG
CGCCTCATTT TTCCGGTCAT AGTGTGGCTC GGGAAAATGC AAGGAAAAGA AAAACGCTTT
CAAAACGCGC CGGAAGCTCA ACCGGCACGT TCGGTGGGCA TCATTTAG
 
Protein sequence
MKTLTMEKVY PVTIDNGHGE RLTFLGREIR DGVEYIQVEN QVSPGAGPPM HVHHQQHESL 
HVVEGKMGIE ILGEQPYFLH KGESATFEAG SAHRFWNAGD SVLHCKGEIW PPHNIEYFLG
EIYRSSREHG NGRPEAFDAA FLLSKYRTEF DMLGIPVFVK RLIFPVIVWL GKMQGKEKRF
QNAPEAQPAR SVGII