Gene Dfer_0060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0060 
Symbol 
ID8223626 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp73214 
End bp74320 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content41% 
IMG OID644927939 
Producthypothetical protein 
Protein accessionYP_003084496 
Protein GI255033875 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.272206 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAG GCATAATAAC CCTCCCGCTC CATTCCAACT ACGGTGGGAT TTTGCAGGCT 
TACGCGCTCC AAAAAGCATT GTCGGCTCTT GGTCACCAGG CATTTGTTAT TCAACCAGAT
AAGCAAAATA TTCCGCTAGT AAAAAGGGCT ATCAAGTTTT CTAAAAACAC GATTAAGTGG
CTCCGCGGAG ACAATGTGAT TTTTAACATC GACGAGTTGA AAGAAAATGC TTCGCGCATC
ACCAGGCCAT TTGTTGATAA GCACATTCCT TTGGTTTCGA AATCCGCCAT TTATTCCGAT
GAAGAGCTGA GAAGTTTTGA TGCATTCGTA GTTGGAAGTG ATCAGATTTG GCGGCCTAAA
TATTACCCGA ACATCGCGGA AGCTTACTTT TCCTTTCTAC CTGAAAACTC AACCGCCAAA
CGTATCGCCT ACGCCCCGTC CTTTGGCACG GATTCATGGG AATATTCCAT CAGCCAAGCC
GCAGAATGTA AAAGACTGAT TGGAAAGTTT AATAGTTTAT CGGTACGCGA AATTTCTGCG
GTTGATTTGT GCAACGCTCA TTTTAATGTA AAAGCTGAGC ATGTGCTTGA CCCGACATTA
CTTATCGAGC GCCAAACTTA TATTGATTTA TTTCAAACAT CAAACAAAAT ACATAGTGGG
GGAACCTTGT TTTCCTACAT TCTGGATATG AATGATGAAA AGACCAGTGC CATTAAGCAT
ATTGAGAAGC AGCTGAATGT AACTTCATTT AGCCCATCCA AACCTAGTAT CAAAAAAAAT
GTTCCGATCG AGCTTAACAT CGAATACTCA GTCGAACAAT GGTTGAAGGC ATTTAATGAT
GCCGAGTTCA TTATTACGGA CTCGTTTCAC GCGGTCGTAT TCTCTATTAT ATTTAATAAG
CCGTTTCTGG TATGGGGTAA CGTGCAACGG GGTCTCACGA GGTTCTCATC TTTGCTACGA
ATTTTTGATC TGGAAGATAG ATTAGTAACC AGCGCAAAAT CTGTGGAGTC AGTTGTAGCA
AAAAAGATTG ATTGGCAGCA TGTAAATTCT TTGCATGAAA AAAAGAAAAA TGAATCCATT
CAATTCCTCC AAGAGGCGCT GAACTAA
 
Protein sequence
MKIGIITLPL HSNYGGILQA YALQKALSAL GHQAFVIQPD KQNIPLVKRA IKFSKNTIKW 
LRGDNVIFNI DELKENASRI TRPFVDKHIP LVSKSAIYSD EELRSFDAFV VGSDQIWRPK
YYPNIAEAYF SFLPENSTAK RIAYAPSFGT DSWEYSISQA AECKRLIGKF NSLSVREISA
VDLCNAHFNV KAEHVLDPTL LIERQTYIDL FQTSNKIHSG GTLFSYILDM NDEKTSAIKH
IEKQLNVTSF SPSKPSIKKN VPIELNIEYS VEQWLKAFND AEFIITDSFH AVVFSIIFNK
PFLVWGNVQR GLTRFSSLLR IFDLEDRLVT SAKSVESVVA KKIDWQHVNS LHEKKKNESI
QFLQEALN