Gene Dfer_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDfer_0003 
Symbol 
ID8223568 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDyadobacter fermentans DSM 18053 
KingdomBacteria 
Replicon accessionNC_013037 
Strand
Start bp2447 
End bp3253 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content51% 
IMG OID644927882 
Producthypothetical protein 
Protein accessionYP_003084440 
Protein GI255033819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0221782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0594362 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT CGTACACATT ACTATTAGCC ATTTCGACAT TCGCATTGCT GTTTTCCTTC 
CGCCAGTTCG ACGAAAGTGC GGAAATGGAC CGCGTTGTTC ACAATAAAAG TTTCGGGACC
GGTGAGCGCG TCGAATACCG CGTGCATTAC GGGTTCATCA ATGCAGCCGA GGCCAAAGTG
GAGGTGGGCA AAGCCGTTTC GATGATCAAC AACCGTCCGT GCTACCGCGT GAACGTAGTC
GGCCGCACGG TAGGCGCATT CGACCTCATT TCGCGCGTCC GCGACACGTG GCGGTCGTAC
ATCGACACTA CGGCCATTCT TCCGCACATG TTTGAGCGGC AAATTCAGGA GAACAAATAC
CGCAAGGAAG AAACGGTGTA TTTCAACCAC AGCAAAGACC AGGCGGTGTC GAATATCAAG
GACGAGCGCA AGACCTACAA TGTCCCGAAC AACATTCACG ACATCATCAG CGGCTATTTT
TTCCTCCGCA CGATCAATTT CGATAAGGTC CGCGAGGGCG AGATCATCGA AGTACCGACG
TTCTTTGACG GCGAAGTTTA CAAGCTCCGC GTCCGCTACG TGGGCCGCGA CGTGATCAAA
ACCAAATTCG GCAAGAGCAA GGTCCTGCGA TTATCGCCGC AAATCCCGTC CAACAAATTC
TTCAAAGGCG AAGAACCGAT GGCGCTCTGG ATATCGGATG ATTCCAACAA AATTCCGCTA
AAAGCCGAAG TCGACCTCAA AATCGGGTCT TTGGAAATGG ATTTAAAGTC GTATAAAGGC
TTGAAGAAAG ATATCGCCTG GTTTTGA
 
Protein sequence
MKRSYTLLLA ISTFALLFSF RQFDESAEMD RVVHNKSFGT GERVEYRVHY GFINAAEAKV 
EVGKAVSMIN NRPCYRVNVV GRTVGAFDLI SRVRDTWRSY IDTTAILPHM FERQIQENKY
RKEETVYFNH SKDQAVSNIK DERKTYNVPN NIHDIISGYF FLRTINFDKV REGEIIEVPT
FFDGEVYKLR VRYVGRDVIK TKFGKSKVLR LSPQIPSNKF FKGEEPMALW ISDDSNKIPL
KAEVDLKIGS LEMDLKSYKG LKKDIAWF