| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_1173 |
|---|
| Symbol | |
|---|
| ID | 5131296 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 1149137 |
|---|
| End bp | 1149871 |
|---|
| Gene Length | 735 bp |
|---|
| Protein Length | 244 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640530098 |
|---|
| Product | peptidase A24A domain-containing protein |
|---|
| Protein accession | YP_001214630 |
|---|
| Protein GI | 147669812 |
|---|
| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.0000000679312 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGGGGCTA TACTGGGCAG TTTTATAAAC ATGCTGTCTG ACCGCCTGCC GGCTGAAAAA
TCCATTATTA CCCCCGGCTC CGGGTGTGAT GTCTGCGGCA AAAGGCTGGG CATTGCTGAC
CTGATACCCA TTTTCAGTTA TATTTTTCTA AAGGGGCGTT GCCGTTACTG CGGAGCGGGC
ATACCTCAAA GAGCTTTGTG GGTAGAGATA GCCACAGCCT GCCTGTTTGG TCTGTTCTGG
GTGATGCTGG GGCCAAGTGT GGAACTGGGT ATAAGCCTTT TGTACCTTTG CGTATTTATC
ACCCTTTTTG TAATAGATCT GGAAAAAGGG CTAATTTTAA ACGTAATTAT TTATCCCCTT
ATGGTGCTGG CACTGCTGCT TTCGCCCCTC TACCTTCAGG GAGACGGTCT GCTGGCAAAC
CTGTCATCTT CGTTTTTTGG CGGGCTGACC GGTTTCGGAC TGTTTCTGCT GATATATATT
GCCTCACGCG GGGGCATGGG GGAGGGGGAT ATAAAAATGG CCGGCTTTAT CGGGCTGGTC
TGCGGTTTCC CCAATATTTT TGTGGCGGTT TTTGCAGGCA TAGTGCTGGG CGGTCTGGCA
GCAGCCGGGC TGATGCTTTC AGGAAAACGC CGCAAAGGTC AGACTATCCC CTTCGGACCT
TTTTTGGCTG TGGGTGCGGT AACTGCCATG CTGTTTGGCA GCCAGATTAT GGAGTGGTAT
CTGGCTCTGG CCTAA
|
|---|
| Protein sequence | MGAILGSFIN MLSDRLPAEK SIITPGSGCD VCGKRLGIAD LIPIFSYIFL KGRCRYCGAG
IPQRALWVEI ATACLFGLFW VMLGPSVELG ISLLYLCVFI TLFVIDLEKG LILNVIIYPL
MVLALLLSPL YLQGDGLLAN LSSSFFGGLT GFGLFLLIYI ASRGGMGEGD IKMAGFIGLV
CGFPNIFVAV FAGIVLGGLA AAGLMLSGKR RKGQTIPFGP FLAVGAVTAM LFGSQIMEWY
LALA
|
|---|
| |