Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0978 |
Symbol | |
ID | 5132223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 965167 |
End bp | 966294 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640529902 |
Product | CoA-binding domain-containing protein |
Protein accession | YP_001214436 |
Protein GI | 147669618 |
COG category | [C] Energy production and conversion |
COG ID | [COG1042] Acyl-CoA synthetase (NDP forming) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00209366 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGGACAAAA TCAAGCTATT TTTCAACCCT AAGAGTGTAG CTCTGGTAGG CGCAACAGAC AAGGAAGGTT CTACCGGCAA AATCATCCTT CAGAATCTTA TAAAAGGTAA AGACCGAAGG GCTGTTTATC CGGTAAACCC GAACCGTGAA TCTGTACTGG AACAGAAGTG CTATCCTACT CTGAAAGACT TGCCCGAAGT ACCTGATTTG GTGCTGGTGG TGGTCCCTGC CAAGTTTGTA CCCCAGGTTA TTGAAGACGC CGGCAAAGTG GGTACCAAGT CTGTTATCAT TATTTCGGCT GGCTTCAAAG AGGTTGGGTC TGAGGGCAAA GCCCTTGAAG AAAAGATAGC CGAGATTGCC AAGCAGTACG GTATCCGCAT TATTGGCCCC AACTGTATGG GTACCATGAG CCCCGCAAGC GGTTTCAATG CCACTTTCGC CCGCATGGAA ATGCCCAAAA CCGGCAATGT GGCCTTCTTG TCACAGAGCG GCGCTTTGGG TTCAGCTGTG CTTGACTGGG CTATTGCCCG AAATGTAGGT TTTTCCGGAT TTGCTTCCAT CGGCTCTATG ATGGATGTGA ACTTCGGTGA CCTTATTGAC TACTTCGGTA CTGACGAAAA TACCAAGAGT ATTATTGTAT ATCTGGAAAC CATGGGCGAA GCCAAGAAAT TCATGAGTGC CGCCCGCGGT TTTGCCCGCA CCAAACCCAT TATCGTTATC AAGCCCGGCC GTTTTGAAGA GAGTGCTCAG GCCGCCAAAT CCCACACCGG CTCAATGGTG GGGAATGCCA TGTTTGTAGA CGCTATTTTC CAGCGTGCAG GCGTGGTTCG GGTGGACAAT ATCGGTGACC TTTTCAGCTG TGCCGCTATA TTAAATACCT CAAATCTGCC CAAGGGGGCA AATCTGGCTA TTGTAACCAA CGCCGGCGGT CCTGCCGTAT TGGCTACGGA CTCGCTGATG GAACAAAAAG GCAAATTGGC TCACATATCT GACGAGACTG TTACCGCCTT GAATCCGGTT CTGCCTCCTT CGTGGAGCAA AGGCAACCCC ATGGATATTC TGGGAGATGC CGATCCTGAA AGGTATGCCG TCACCCTTGA AGCCGCCATC AAAGACCCCG GTGTGTGA
|
Protein sequence | MDKIKLFFNP KSVALVGATD KEGSTGKIIL QNLIKGKDRR AVYPVNPNRE SVLEQKCYPT LKDLPEVPDL VLVVVPAKFV PQVIEDAGKV GTKSVIIISA GFKEVGSEGK ALEEKIAEIA KQYGIRIIGP NCMGTMSPAS GFNATFARME MPKTGNVAFL SQSGALGSAV LDWAIARNVG FSGFASIGSM MDVNFGDLID YFGTDENTKS IIVYLETMGE AKKFMSAARG FARTKPIIVI KPGRFEESAQ AAKSHTGSMV GNAMFVDAIF QRAGVVRVDN IGDLFSCAAI LNTSNLPKGA NLAIVTNAGG PAVLATDSLM EQKGKLAHIS DETVTALNPV LPPSWSKGNP MDILGDADPE RYAVTLEAAI KDPGV
|
| |