Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0972 |
Symbol | |
ID | 5132313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 959559 |
End bp | 960422 |
Gene Length | 864 bp |
Protein Length | 287 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640529896 |
Product | membrane protein-like protein |
Protein accession | YP_001214430 |
Protein GI | 147669612 |
COG category | [S] Function unknown |
COG ID | [COG2339] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.00000387152 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGGCGC GGCTTTTTGA TGTTAGGCTT ATACTGACGG ATATGAGTTA TCTGAAGAAT ATTAAAATAT ACCTGACAAC CTACCGCTGG ACTTGGGTAC TGATAGGCGG GCTGGGTTTG TTTCTGGGTG CGGAACAGCT TATAAAACTG ACGCATGGGA CTAATTTTTT GCCGTTACTG GTAGTTCTGG GTGCATTCAT CATGCCGGTG ACTTTTGTGG TGTTTATTTA TGAACGTTTA CCTCTGGCTA ACATAACTAT TCGTTGGGTG CTGGCCAGTT TTTTTGTCGG CGGTATGATT GGGCTTTTAA TGGCAGGTAT GCTGGAATAT GCCACTGGCT CCAGCCTGAG CCCAGCCGGA CTACTCCGGG TAGGAGTTAT AGAAGAAGCT GCCAAGCTGA TATTCCCTTT TCTGCTTTTT TGGGGCGGCG GTTTCAGGGC TGAGGCTAAC GGAGTTCTGT TTGGAGTAGC AGCCGGCATG GGTTTTGCAG CGTTGGAAAC TATGGGTTAC GGGGTGGTCA GCCTTATCCA GAGTCAGGGG GATATAAACC TGTTGGAACA GGTGCTTCTT TTCAGAGGGC TGTTATCTCC TGCCGGGCAT GCCGCCTGGA CTGGCATAGT CTGTGCTATC CTGTGGAGAC AGCGCGCCGA ATATGGCAGA GGGCCTGTAA ATATGGCGGT TATAGGGGCT TTTATATTGG CAGTGGGCCT GCATATTGTC TGGGATATAG CCAGTGGATT GAATCTGCCC GTTGTTTGGG CGGTAATCGT ATTATTAACG GTGGCCGTTT TAAGCTTGCT TTTACTTATC CGGGCTATAC GTCATGCCCG ATACCAGTTG CGGAGGGGTA ATTCAACTGT TTAA
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Protein sequence | MKARLFDVRL ILTDMSYLKN IKIYLTTYRW TWVLIGGLGL FLGAEQLIKL THGTNFLPLL VVLGAFIMPV TFVVFIYERL PLANITIRWV LASFFVGGMI GLLMAGMLEY ATGSSLSPAG LLRVGVIEEA AKLIFPFLLF WGGGFRAEAN GVLFGVAAGM GFAALETMGY GVVSLIQSQG DINLLEQVLL FRGLLSPAGH AAWTGIVCAI LWRQRAEYGR GPVNMAVIGA FILAVGLHIV WDIASGLNLP VVWAVIVLLT VAVLSLLLLI RAIRHARYQL RRGNSTV
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