Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0840 |
Symbol | |
ID | 5132336 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 826914 |
End bp | 827492 |
Gene Length | 579 bp |
Protein Length | 192 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640529757 |
Product | manganese and iron superoxide dismutase |
Protein accession | YP_001214301 |
Protein GI | 147669483 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0605] Superoxide dismutase |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00121294 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACACTG CACGTGACTA TTCTGCCCTG ACTGGTATTG AAGGGTTTTC TGATACCCTG CTTAAAAACC ATTTTACTTT ATACCAAGGT TATGTAAACA ACACCAACAA ACTTGCGGAT ACTTTAAAGG CCATGCTTGC GGAAGGTAAA ACAGCTACGC CGGAATATGC TGAGCTCAAA CGCCGTTTCG GGTTTGAATT TGACGGTATG CGTTTGCACG AATACTATTT TTCTAACCTT GGAAAATCTG TACCCCTATC AGAAACGGGC AAATTCTACC AGGCACTGGC AGCAGAATTC GGTAGTTACC AGCTCTGGGA AGCAGACTTT AAAGCTACCT CCGCTATGCG GGGCATAGGC TGGGTAATAC TCTATAAAGA CCCTCAGACC GGACGCCTGT TTAACCAGTG GATAAACGAG CATGAAGCCG GGCATCTGGC AGGTGCCACC CCGATACTGG TAATAGACGT ATTTGAACAT GCCTTCCTGA CAGATTACGG GCTGAAACGA GCAGAATACA TTGCTGCCTT TATAAAAAAT ATAAACTGGT CTGAGGTGGA AAAACGTTTC CTGATATAA
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Protein sequence | MYTARDYSAL TGIEGFSDTL LKNHFTLYQG YVNNTNKLAD TLKAMLAEGK TATPEYAELK RRFGFEFDGM RLHEYYFSNL GKSVPLSETG KFYQALAAEF GSYQLWEADF KATSAMRGIG WVILYKDPQT GRLFNQWINE HEAGHLAGAT PILVIDVFEH AFLTDYGLKR AEYIAAFIKN INWSEVEKRF LI
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