| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0723 |
|---|
| Symbol | surE |
|---|
| ID | 5131239 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 713244 |
|---|
| End bp | 714041 |
|---|
| Gene Length | 798 bp |
|---|
| Protein Length | 265 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529634 |
|---|
| Product | stationary phase survival protein SurE |
|---|
| Protein accession | YP_001214185 |
|---|
| Protein GI | 147669367 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0496] Predicted acid phosphatase |
|---|
| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 1 |
|---|
| Plasmid unclonability p-value | 0.000000069288 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGAATAC TGGTAAGCAA TGACGATGGT ATTTATTCAC CCGGCCTGTG GGCATTGGTG
AAAAGGCTTA AAGAAGTTGG CGAAGTGATA GTGGTGGCGC CTGACCGTGA GCAAAGTGCC
ACCGGTACTC AGGTGACCCT GCGCCAGCCG CTCAGGGTGC AGAAGACTCA CCCGCTTATT
CCGGGGATTG AGGCTTATGC GGTAGAAGGC AGCCCCTGTG ACTGTGTAAT ACTGGGTTTA
GCCAAGCTAA TAACCGAACC GGTAGATCTA GTGGTTTCAG GTATCAATCA CGGTCTGAAC
TTGGGGGATG ATGTGCTTAT CTCAGGTACG GTGGGTGCCG CCCTTCAGGG TTATTTGCGT
AACATACCTT CAATAGCCGT CTCCATACCC GTTACCATGG AAGAACCGGA AAATCTGGAT
AGTGCCGCCT GTATTACGGC GGAGGTATCA CGCCGGATAC AAAACGGAGA TATTACAAAG
AATTCTTTTC TAAATATAAA TATACCTGAC CTGCCGCTTT CCCAAATTGA AGAACTTAGG
GTTACCCCGC TGGCACATAA AACCCATATA GAAACGGTTG AAGAGGGACA TGATGGCAGG
AAACGGTATT TTTGGCTTAG ACGCCGCCAG TTAAGTTCGG CGGATAATAA AAAAACCGAT
ATCTGGGCTA TAGAAAATGG GTATATCACT ATAAGCGCTC TCCATGAAAG GCTTTTCCAA
CAACCCGTGT TTACTCTTAA AGATGCTGAA ACTGCCGGGA TATTGGCAGC TGCCAGATCC
TGCCAGGATA AAATCTAG
|
|---|
| Protein sequence | MRILVSNDDG IYSPGLWALV KRLKEVGEVI VVAPDREQSA TGTQVTLRQP LRVQKTHPLI
PGIEAYAVEG SPCDCVILGL AKLITEPVDL VVSGINHGLN LGDDVLISGT VGAALQGYLR
NIPSIAVSIP VTMEEPENLD SAACITAEVS RRIQNGDITK NSFLNINIPD LPLSQIEELR
VTPLAHKTHI ETVEEGHDGR KRYFWLRRRQ LSSADNKKTD IWAIENGYIT ISALHERLFQ
QPVFTLKDAE TAGILAAARS CQDKI
|
|---|
| |