| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0645 |
|---|
| Symbol | clpP |
|---|
| ID | 5132414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 635211 |
|---|
| End bp | 635813 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640529548 |
|---|
| Product | ATP-dependent Clp protease proteolytic subunit |
|---|
| Protein accession | YP_001214108 |
|---|
| Protein GI | 147669290 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0740] Protease subunit of ATP-dependent Clp proteases |
|---|
| TIGRFAM ID | [TIGR00493] ATP-dependent Clp protease, proteolytic subunit ClpP |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.567872 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAAGCC CTGAAAACGT AGTACCTATG GTTATTGAGA GCAGTGCCAG AGGAGAACGT
GCCTTTGACA TTTATTCTCT ATTGCTGAAG GAAAGAATTA TCTTTCTGGG TTCGCAAATA
AACGATCAGG TAGCCAATCT GGTTATTGCC CAGTTACTGT TTCTTGACAG GGAAGACCCG
GACAAGGATA TCAGTCTATA TATACACAGC CCCGGCGGGG TAATATCTGC CGGTCTTGCC
ATGTACGATA CCATGCAGCT TATACGCCCC AAGGTATCCA CCATTTGCGT AGGCGTGGCT
GCTTCCATGG CAACTGTACT CCTGTGTGCC GGTGCTAAAG GCAAACGCTA TGCCTTGCCT
AATGCTACCA TTCATATGCA TCAGGCTATG GGTGGTGCTC AGGGACAGGC TTCGGATATT
GAAATTGCCG CCCGCGAGAT TATGCGCCAG CAGGATATTT TGCGGAATAT TCTGGTAAAA
CATACCGGCC AGACCATGGA GAAAATAGTC CATGACAGTG ACCGTGACTA TTATTTGAGT
GCCCAGCAGG CGGTGGAATA CGGTTTAATA GACGAAATTT TGCAGAAACC TGAAAACAAA
TAA
|
|---|
| Protein sequence | MISPENVVPM VIESSARGER AFDIYSLLLK ERIIFLGSQI NDQVANLVIA QLLFLDREDP
DKDISLYIHS PGGVISAGLA MYDTMQLIRP KVSTICVGVA ASMATVLLCA GAKGKRYALP
NATIHMHQAM GGAQGQASDI EIAAREIMRQ QDILRNILVK HTGQTMEKIV HDSDRDYYLS
AQQAVEYGLI DEILQKPENK
|
|---|
| |