Gene DehaBAV1_0614 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDehaBAV1_0614 
Symbol 
ID5131743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDehalococcoides sp. BAV1 
KingdomBacteria 
Replicon accessionNC_009455 
Strand+ 
Start bp602521 
End bp603183 
Gene Length663 bp 
Protein Length220 aa 
Translation table11 
GC content49% 
IMG OID640529517 
Productribulose-phosphate 3-epimerase 
Protein accessionYP_001214077 
Protein GI147669259 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0036] Pentose-5-phosphate-3-epimerase 
TIGRFAM ID[TIGR01163] ribulose-phosphate 3-epimerase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGACG TAAAAGTAGT GCCGGCTATA CTTACAGATG ATCCTGCGGC CTTTGAGTCC 
ATGATAAAAC AGTCAGAGGG TTTTGCACCG GTTGCCCAGA TAGATATCAT GGACGGGCAG 
TTCGTGCCTT CGCTAAGCAT ACCCCCGGAG GTTCTGGGCA GATATAAGCC CTGTTTTGCT 
TCCGAAATAC ACTTGATGAC CCTGAATCCG GAAGAGTATC TGACTTACTG CAAGCAGCAT 
GGTGCTCGCA GGGTAATATT CCATTTTGAG GCAACCCCCC GCCCTGAATA TGTTATCAGC 
AGGATAAAAG AGATGGGTTT TAAGGTGGGA TTGGCAGTAA ACCCGGAGAC CTCTGTTGCA 
GAGTTTGCTT ATCTGGTGCC GCAGGTGGAT ATGGTGCTTT TCATGTCGGT TATTCCCGGT 
TTTTACGGCG CGCCGTTTAT ACCTGAGGTA CTTCTCAAGG TAAAAGAGTT TAAAAGGCGT 
TTCCCTGAAA CCGAAATAGG GCTGGACGGC GGGGCCAAGC AGGCCAATAT ACCTGAGATT 
GTGGCGGCAG GGGTAAATGA TATATGCGTG GGGAGTGCTA TTTTCCGGCA ATCCGATCCG 
CAGTCAAGCT ACCTGTATTT GGATAAACTG GCCAAAAATT CGGCTAAGGA AGCCGGGCTT 
TAG
 
Protein sequence
MKDVKVVPAI LTDDPAAFES MIKQSEGFAP VAQIDIMDGQ FVPSLSIPPE VLGRYKPCFA 
SEIHLMTLNP EEYLTYCKQH GARRVIFHFE ATPRPEYVIS RIKEMGFKVG LAVNPETSVA 
EFAYLVPQVD MVLFMSVIPG FYGAPFIPEV LLKVKEFKRR FPETEIGLDG GAKQANIPEI 
VAAGVNDICV GSAIFRQSDP QSSYLYLDKL AKNSAKEAGL