Gene DehaBAV1_0482 details

Gene Information

• Locus tag: DehaBAV1_0482
• Symbol: rplM
• ID: 5131821
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Dehalococcoides sp. BAV1
• Kingdom: Bacteria
• Replicon accession: NC_009455
• Strand: +
• Start bp: 469101
• End bp: 469532
• Gene Length: 432 bp
• Protein Length: 143 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640529384
• Product: 50S ribosomal protein L13
• Protein accession: YP_001213945
• Protein GI: 147669127
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0102] Ribosomal protein L13
• TIGRFAM ID: [TIGR01066] ribosomal protein L13, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 1
• Plasmid unclonability p-value: 0.0000000150083
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACACTT ACACAGTTAA AGCTAGTGAC ATAAAACGGG ATTGGCACGT AATAGATGCC 
TCCGGCCGTG TGCTGGGTGA GGTAGCTGCT GAAGCGGCCA AATACCTCAT GGGCAAGCAC 
AAACCCATGT TCTGCCGCAA TCTGGATTGC GGTGACTACG TGGTTATCGT AAATGCAAAG 
AAGATAACGG TTACCGGCAA CAAGCTGGAC CAGAAGATGT ATTATCGCCA TTCCGGCTTC 
CCCGGCGGTT TCCGCCAGGA AAAACTGGGT GACCTTCTGA AAACCAAGCC TTTGTTTGTG 
ATTGAACATG CTGTAAAGGG CATGATTCCC CGCAATACCT TGGGTGCCCA GATTTTGGCT 
AAATTAAAGG TCTATGAAGG TGCGGAACAC CCCCATGCCT CTCAGACCGG CGTAGTAAGC 
AAGGAGTCTT AA 

 

Protein sequence

MNTYTVKASD IKRDWHVIDA SGRVLGEVAA EAAKYLMGKH KPMFCRNLDC GDYVVIVNAK 
KITVTGNKLD QKMYYRHSGF PGGFRQEKLG DLLKTKPLFV IEHAVKGMIP RNTLGAQILA 
KLKVYEGAEH PHASQTGVVS KES