Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0402 |
Symbol | |
ID | 5131126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 405815 |
End bp | 406591 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529304 |
Product | hypothetical protein |
Protein accession | YP_001213865 |
Protein GI | 147669047 |
COG category | [R] General function prediction only |
COG ID | [COG1234] Metal-dependent hydrolases of the beta-lactamase superfamily III |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.424061 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAATAG TATTTTTAGG TGCTCATAAT TGCGAAACCA AAACCACCCG CCCCAGTTGC CTCATGCTTT CCGGCGGGGT GGTGCTGGAC GCAGGTGCTA TTACCGGAAG CCTGACATTG GACGAACTCT ATAGCCTGAA AGCGGTTATT TTAAGCCATG CCCATTATGA CCACATAAAA GATGTGCCGC TACTGGCTAT GAATTTGGCT TACGGCCTGA AAAGTGTGGA TATTTACGGC AGTCAGGCCG TTGAAGAAGT AGTCACCAAG CCGCCTTTTT CCGGCGGTTT TTACCCTGAT TTTTTTACCC GCCCGCCCTC TGCTCCGGCT TTGCGGTTTA ATAAGATTAC CCCCGGTTTG GAATTTGACT GTCAGGGTTA CCGTATATTG CCGGTATCTG TCCCTCATTC CAGAGATACC ACCGGTTTTT GGGTAAAAGA CTTAAACGGG CATTCGTTTT TTTATACCTC GGATACAGGG TCTGGTCTGG GGGCTGTCTG GGAACAGGTT AACCCCGAAC TGCTTATTAT TGAACTGACC ATGCCGAACA AACTCACTGA GCTGGCTTTA ACCTCCAAGC ACTTGTCACC TGAGCTTTTG GAGACGGAGC TTTTACTGTT CAGGGAGATG AAAGGTTATC TGCCCCAAAT AGTTACCCTT CATACCACGC CGTTGTTTGA AGAAGAGATT AAAACTGAAA TACAGGCAGT AGCGGATAGA TTGGCTGCTG ACATATTTAT GGCCAGTGAA GGGCTGAAAC TCCGTCTGGG AGAATAG
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Protein sequence | MEIVFLGAHN CETKTTRPSC LMLSGGVVLD AGAITGSLTL DELYSLKAVI LSHAHYDHIK DVPLLAMNLA YGLKSVDIYG SQAVEEVVTK PPFSGGFYPD FFTRPPSAPA LRFNKITPGL EFDCQGYRIL PVSVPHSRDT TGFWVKDLNG HSFFYTSDTG SGLGAVWEQV NPELLIIELT MPNKLTELAL TSKHLSPELL ETELLLFREM KGYLPQIVTL HTTPLFEEEI KTEIQAVADR LAADIFMASE GLKLRLGE
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