Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0334 |
Symbol | |
ID | 5132403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | + |
Start bp | 343069 |
End bp | 343989 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640529234 |
Product | hypothetical protein |
Protein accession | YP_001213798 |
Protein GI | 147668980 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0140873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCAATTT CATTAACCGA GGCTTCAAAG CTTTCAAACG ATATTCTCAA GCAGGGGGTG ATTGAGACTA TTGTCAGGGA ATCTCCCGTT TTAGCCAATA TGCCCTTTAT AGAGGTAATG GGTAACGGGC TGACCTATAA CCAGGAGAAA ACCCTGCCGG ATATCAGTTT TTATGACACC GGTGACACCT GGGATGAATC TACCCCCACC TTTGAACAGA AAACTGCCCA GCTGAAGATT ATGGGTGGTG ATGCTGACGT GGACAATTTC CTGAAGACCA CCCGGAGCAA TGTTCAGGAT CTGGAAACGG CCATTATTGA GCTGAAAGCC AAAGCCCTGA AGGATAAGTT TGAAGAGGTC TTTATTTACG GTGATTCGGC GGTAAGCTCA AAACAGTTTG ATGGCTTAAG GAAGCTGATT AATCCTGCTT CGGCCAGTTC CCAGCTGGTT GCCGCCGGTG CTTCCGGTGC CAGTCTGAGT CTTGCCAAGC TGGATGAACT GGTGGATGCG GTAAAAGGCG GCAAACCGGA TATGCTCCTG ATGAGCCGCC GCAGCCGCCG CAAACTGAAT GCCCTTTTAC GGGCGGGTGG AGGCATGCTG GAAACTGACC GTGATAAATG GGGCAACTTT ATCCAGTTTT GGGATGGTAT ACCTATCGGG GTGAGTGACT GGATTTTGGA TACCCATGTG GTTGCCGAAG GACTGGAAAC TGCTACTTCG GGTGGCGGGT GCTCTGCTAT TTATGCCCTG CAGTTTGGCG AGGGCGGTCT TTGCGGCCTG AGCAGCCCCG GCTTTGTTCA AGTGGAGGCT TTAGGCTCAC TGGAAGATAA GGACGCCAGC CGCACCCGGG TTAAATGGTA CTGCTCACTG GCCCTTTTCA GTGCGGTCAA GGCGGCCGCA CTTATCGGGG TAACGGACTA A
|
Protein sequence | MAISLTEASK LSNDILKQGV IETIVRESPV LANMPFIEVM GNGLTYNQEK TLPDISFYDT GDTWDESTPT FEQKTAQLKI MGGDADVDNF LKTTRSNVQD LETAIIELKA KALKDKFEEV FIYGDSAVSS KQFDGLRKLI NPASASSQLV AAGASGASLS LAKLDELVDA VKGGKPDMLL MSRRSRRKLN ALLRAGGGML ETDRDKWGNF IQFWDGIPIG VSDWILDTHV VAEGLETATS GGGCSAIYAL QFGEGGLCGL SSPGFVQVEA LGSLEDKDAS RTRVKWYCSL ALFSAVKAAA LIGVTD
|
| |