| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0312 |
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| Symbol | secF |
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| ID | 5132328 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | - |
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| Start bp | 319927 |
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| End bp | 320832 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640529212 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_001213776 |
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| Protein GI | 147668958 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.111019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATAAGA TAATACAACA CAGACCCCTG TTTATATTTA TATCCGCCCT GATAATACTG
GCCGGACTGG CCTCACTGCT GATATTCGGG CTGAAACCCG GCATCGAATT TTCCAGCGGC
TCAATGCTGA CCGTCAAGTT TGACCAAACA GTCAGCATTG ATGAACTCAC TCAGGAACTG
AGAAGTCTGG GGCAAAACGA AGCTATTGTT CAGGTAACCG GTGACGGAGA TTATCTTATC
CGCACCAGCC AGCTTGATGT TAGCCAGAAA ATCTCTCTGG AAACTTCTCT AGAAGAAACA
TTCGGCAACC TGACCGAACG CGGTTTTGAA AATGTAGACC CAATGATTGC CAGGCAGACC
ACCCAAATGG CGCTGATAGC TATTGGGGCG GCTCTGGTGG GCATTCTTCT GTATGTTACC
TGGGCCTTCC GCCGCATGCC CAAACCTTTC CATTACGGCA CCTGCGCAGT CATAGCCCTT
TTCCATGACG CCCTGGTGGT ACTGGGCATA TTCGCCCTGC TGGCGGGTAT CTTCGGCTGG
GAAATAAACC TTATGTTCAT TATCGGTATC ATGGCCGTTA TCGGCTACAG TATCAACAAC
ACCGTAGTGG TCTTTGACCG CATACGGGAA AACCAGCTTA AAGGCATTCA CCCCAGCTTT
GAGGTAGTGG TGAACCAGAG TATTATGGAA ACCGTAGTCC GTTCCATTAA CTCCAGCTTT
ACGGTTATCA TTACTGTAGT AGCCCTTATG CTCTTCCTTG GGGCGTCTAT CCAGAACCTA
AGTATAGTTA TGCTTATCGG TCTTATTGCC GGTACTTATG ACTCACTTTT TGTTGCCCCT
TCCCTGCTGG TTACCTGGGA AAATGGTGAC TGGGGCAAAC TGCTTAAACC CTTTAAAAAA
GCTTAA
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| Protein sequence | MNKIIQHRPL FIFISALIIL AGLASLLIFG LKPGIEFSSG SMLTVKFDQT VSIDELTQEL
RSLGQNEAIV QVTGDGDYLI RTSQLDVSQK ISLETSLEET FGNLTERGFE NVDPMIARQT
TQMALIAIGA ALVGILLYVT WAFRRMPKPF HYGTCAVIAL FHDALVVLGI FALLAGIFGW
EINLMFIIGI MAVIGYSINN TVVVFDRIRE NQLKGIHPSF EVVVNQSIME TVVRSINSSF
TVIITVVALM LFLGASIQNL SIVMLIGLIA GTYDSLFVAP SLLVTWENGD WGKLLKPFKK
A
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