| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0257 |
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| Symbol | |
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| ID | 5132013 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 263871 |
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| End bp | 264935 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640529158 |
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| Product | hydrogenase (NiFe) small subunit HydA |
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| Protein accession | YP_001213723 |
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| Protein GI | 147668905 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA)
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTAATA CTAAACTTAC TAGACGGGAT TTTGTACAGC TAGCCGCCGG CTCTACTGCC
GCCCTGAGTC TGGGAGCTTT GAAGCTCCCC GAATTTGAGA AAATGTTTGC CGAGGCTTTG
AAAGAAATCC CGGTTATATG GCTACAGGGT GCCGGCTGCA ACGGTTGCAC TATCTCTACT
CTCAACGTTG TATCGCCCAC CATCCAGGAT TTACTGCTTA CTTCGGTAGT TCCCGGTACT
CATGTTTCCA TGCAGTTCCA CCCCACCATT ATGGCCGCCC AGGGTGACCT GGCTATGAAC
ACTATTACCG ATACTGCCGC CAAAGGGCCT TTTGTGCTGG TAATTGAAGG CTCTGTACCT
CTTAAGGATG GCGGGATTTA CGCCGAAGTC GGCGAAAAAG ACGGCGAAGG AATCACCCTG
CTTGAGCACG TACTGAACCT GGCTCCCAAG GCACTGGCCG TAGTAGCTGC CGGTACCTGT
TCCGCTTTCG GCGGAATTAC AGCTGCCGCT CCCAATCCCA CCGGCGCCAA GGCCGTTTCA
GAGATTCTTA AAGACCATAA TATAACTACC CCTGTTGTAA ATCTGCCCGG CTGCCCCCCT
CATCCGGATT GGGTAGTGGG CACTCTGGCT ACTGTACTTA TGAGCGGGCT GGACGCGCTT
GACCTTGACG ATATGGGGCG TCCCAAGGCT TACTATGGCA AACTGCTGCA TGACCAGTGT
CCGCGCCGCG GCCACTACGA AAAGGGTCTG TTTGCCACCA AGCTATCTGA GCCTTACTGC
CTGTTCCTGG TGGGTTGCAA AGGCCCGGTA ACCTATGCTG ATTGTTCTGA CAGGCTCTGG
AACAATAAAA CCCGCTGGTG CGTGGAAGCT GATTCGCCTT GTATCGGCTG TGCCCACCCC
GGCTTCCCGG ATGCGGTTTC TCCCATGTTT GAAGCCCCGC CTGTTATTAA TAGTACTGAC
AAACTGGCTA TCGGTATTGC CGGCACTGCC GTTGTACTGA CTGCCGGTGT AGCTGCTGTA
GAACTTGCTA AAAAAGCCAA GCGGAATGCC GCGAAAAAGG GTTAG
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| Protein sequence | MFNTKLTRRD FVQLAAGSTA ALSLGALKLP EFEKMFAEAL KEIPVIWLQG AGCNGCTIST
LNVVSPTIQD LLLTSVVPGT HVSMQFHPTI MAAQGDLAMN TITDTAAKGP FVLVIEGSVP
LKDGGIYAEV GEKDGEGITL LEHVLNLAPK ALAVVAAGTC SAFGGITAAA PNPTGAKAVS
EILKDHNITT PVVNLPGCPP HPDWVVGTLA TVLMSGLDAL DLDDMGRPKA YYGKLLHDQC
PRRGHYEKGL FATKLSEPYC LFLVGCKGPV TYADCSDRLW NNKTRWCVEA DSPCIGCAHP
GFPDAVSPMF EAPPVINSTD KLAIGIAGTA VVLTAGVAAV ELAKKAKRNA AKKG
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