| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0243 |
|---|
| Symbol | |
|---|
| ID | 5132002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dehalococcoides sp. BAV1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009455 |
|---|
| Strand | + |
|---|
| Start bp | 244769 |
|---|
| End bp | 246160 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640529145 |
|---|
| Product | cobyrinic acid a,c-diamide synthase |
|---|
| Protein accession | YP_001213710 |
|---|
| Protein GI | 147668892 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1797] Cobyrinic acid a,c-diamide synthase |
|---|
| TIGRFAM ID | [TIGR00379] cobyrinic acid a,c-diamide synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATTTCC CCCGTATTGT TATAGCCGGA GTTTCTTCAA GCAGCGGCAA GACTACCATA
AGCAGCGGCC TTACTGCCGC CCTTGCCCAA CGCGGACACA AAGTAGCCGC CTATAAGTGC
GGCCCTGATT ATATAGACCC CGGATACCTT ACTCTGGCTT CAAATAATCC CTGCCATAAC
CTTGATTCGT GGATGCTAAG TAAAGACGCT ATGACAGAGG TATTTTTTCA CGGTCTGAAA
AACCGGGATA TAGCTCTGGT AGAAGGCGTT ATGGGATTGT ATGACGGATA CAGCGGGGAA
CGCCCCGGAG GGTCTACAGC CGAAATAGCC CGGTTACTCT CAGCCCCTGT CATACTGCTA
GTAAATATTT CACATATGGC TGAAAGTGCT GCCGCCATAG TTCTGGGTTA TAAAAATCTG
GATCCCCGTA TAAATATTGC CGGCGTTATA CTCAACCAGG CAGGGAGTAC GCGCCATTAT
GAAATCTGCC GCAAAGCAAT TGAAAAATAT GCCTCAACCC CGGTGATAGG CTACCTGCTT
CGCAATAAAG ATTTGGTCAT ACCGGAACGC CATCTAGGAT TGAAAACTAC CTCTGAAGGC
GGAGAACTGG AAACCTTTAT CCAAAATCTG GCTACCCGTA TTGAAAGCAC TATAGATATT
GACCGTATTC TGGAAATTGC CCGCAATGCC CCACCCCTGC CTGAGAAACC CCTGCCTTGT
CTGTTCCCAG AAACTCCAGC CTGCCCCGTT ACCCGCATAG CCGTAGCCAA AGATGAAGCT
TTCAGTTTTT ATTATCAGGC TAATCTGGAT ATGTTGTCCG ACTGGGGGGC AGAGCTTTGT
TATTTCAGCC CGGTGCATGA TACCTGCCTG CCTCCGGATA TCGGCGGCAT ATATATAGGA
GGCGGCTTTC CGGAAATAAT GGCCGCTGAA CTGAGTGCCA ACCAGCCCAT GAAAGACACA
CTGACCAAAG CGGCGGCGGA TGGCATGCCC ATTTATGCCG AATGCGGCGG GCTTATGTAT
TTATCCGAGG CTATAGAAGA TTTTGATAGT ACTAAATACT TAATGCTGGG ACTGCTACCT
GGCATATCCG TTATGCAGAA GAAGCTTCAC CGTCTGGGAT ATACCAGAGC AGCGGTGCAA
AATGACAATA TCCTGTCTGC CAAAGGCACA GAACTCCGCG GCCACATTTT CCACTGGTCA
AAGCTGCCCT CACCTCAGAC CAAACCTGCC TATACCTTGC TGGAACCAGC CGAATTTATC
GGCCAAAATG AAGGCTTTAT CGTAGGGGGC AGTACTAACG TACTGGCCAG TTATCTTCAT
CTTCATTTCG GCACAAACCC CGACCTGGCA AAGAATTTTA TTCGTATTTC CAAAGATTTT
TGTACAATTT AA
|
|---|
| Protein sequence | MNFPRIVIAG VSSSSGKTTI SSGLTAALAQ RGHKVAAYKC GPDYIDPGYL TLASNNPCHN
LDSWMLSKDA MTEVFFHGLK NRDIALVEGV MGLYDGYSGE RPGGSTAEIA RLLSAPVILL
VNISHMAESA AAIVLGYKNL DPRINIAGVI LNQAGSTRHY EICRKAIEKY ASTPVIGYLL
RNKDLVIPER HLGLKTTSEG GELETFIQNL ATRIESTIDI DRILEIARNA PPLPEKPLPC
LFPETPACPV TRIAVAKDEA FSFYYQANLD MLSDWGAELC YFSPVHDTCL PPDIGGIYIG
GGFPEIMAAE LSANQPMKDT LTKAAADGMP IYAECGGLMY LSEAIEDFDS TKYLMLGLLP
GISVMQKKLH RLGYTRAAVQ NDNILSAKGT ELRGHIFHWS KLPSPQTKPA YTLLEPAEFI
GQNEGFIVGG STNVLASYLH LHFGTNPDLA KNFIRISKDF CTI
|
|---|
| |