Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | DehaBAV1_0144 |
Symbol | |
ID | 5132275 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dehalococcoides sp. BAV1 |
Kingdom | Bacteria |
Replicon accession | NC_009455 |
Strand | - |
Start bp | 143472 |
End bp | 145091 |
Gene Length | 1620 bp |
Protein Length | 539 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640529047 |
Product | hypothetical protein |
Protein accession | YP_001213613 |
Protein GI | 147668795 |
COG category | |
COG ID | |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAAAACG AGTCTGCTTT GCTTGCGTCT TCAAAGCTGT TTTGTATTTT GGCACTGGTT CTGTGGGGTT TAAGCCTTTC GGGAGATGGT TTTAACCCGG ATATGGGAAC TATGCTCAAA CCGCCAATGC TTCTTTTTGT ATCCGGTTTG GGTTTTTTGT GCCTTGGGTC AGTCTTTCTC TGGAAGATGC GTGCCTCCCA AACCCGTTTA CTGTGTTTAT ATACTTTTAT AATGCTGGCC ATGCTCTGGC TGAGTCCGGT TATCATGCAG TCCAGCCCGG TTTCCGCCCA GTGGGCATAT GGTATTTATT ACCCCAATAC CCAGTTTATA AGCCAGACCG GCGGTATTGA CCCAGCTGGG TATACATTTC ACAACTGGCC GGGGTTTTTC ATACTGGATT ACAGTCTGTC GGCTGTGGCA GGTACTTCCT GTCTGGATTT TATGGCCTTT TACGGGCCGT TTCTTATGCA AGTCTTGATA CTTGTGCCTC TATATTGTTT GTTTAAGAAT ATTATTCCCA ACCCCAATCA CCGTTTTGCA GCTATCTGGG TATTTTATCT GGCGAATTGG GTAGCCCAGC TTTATTTTGT GCCCCAAGGA GTGGGGGTTT TCTTTTTGAT TTGCCTTTTA GCCATTATTA CCAGCCCCGG TTTTTCAGCT TCTGAGGGTA ACGCCGTTTC CCACCGGGTG GTTATTATTC TGGTGCTGGC GGCACTGACC GTCAGTCACC TGTTGACCTC TATAGTGGCC TTGCTGTGTG TGGGGGCTTT AACTTTGAGC CGTCTGGTAA AGGGATTTAA TTTGGGAATA TTAGCCGGGA TGCTGGTGGG TTGCTGGACT ATTTACGGGG CGGCTACCCA GTTTGATTCC CAGCTGCCGG ATTTTGCTAA CCGTGCCTTT GAGCTTGAAA ACCTTTTCCA GTTTTCTTCC TCCAGTGGAG GGGTAGATGC AGGGGCGGCT TTTCTGGAGA TTTCGCGGGC GCGGTTTATT TTCTCCGGGC TGTTTGCCGG GCTGGCGGTT CTGGGTGTGC TTTTATCCCT CAAATACCGC AACCGTTTTG ATTTTTCACT CTTTGCTCTG GAAGGAGTGG CTATAGTAAT TTTGTGCAGT ATGCTTTACG GTTCAGAATT CTGGACACGG GCCTTCCTGT TTTCACTGGT GCCTATTGCC TATTTTGCGG TCAAACTACT GCGTAACCGC CTGAGTACGC TTGTTATGGC GGCAGTTTTG CTGGTAGCTA TTCCCGGTCA TCTGCTGGCA CACTACGGGG CAATACCTGA TATGGTCAGC CGCTTTGATC TGGCTGCCTG GCAATATCTG GAAAACTATA CATTGAGGGG ATATATAAGC GGGGGTATCA GCTATATAAA ACCTGATTAT CTGAGCTTGC CACTGAAAAA ACTGGACTGG CAGGATGGTT TACTGGTTAG CCAAGGGTAT ACAGGGCGTT ATCCCCAGTA CCTGCAAATC GGCAGAAGTA CCGGTGTGGG CTGGGTTTAT TACAACGGGG ACAGCCAGTA TGTACCTGCT CTGGAAGCTG CCCTTGAAGA TTCGGCCAGC TACGGGCTTA TCTACCAGAA CGGGGAAATG AATATCTACT TTAATCAGGG GGCAAACTGA
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Protein sequence | MKNESALLAS SKLFCILALV LWGLSLSGDG FNPDMGTMLK PPMLLFVSGL GFLCLGSVFL WKMRASQTRL LCLYTFIMLA MLWLSPVIMQ SSPVSAQWAY GIYYPNTQFI SQTGGIDPAG YTFHNWPGFF ILDYSLSAVA GTSCLDFMAF YGPFLMQVLI LVPLYCLFKN IIPNPNHRFA AIWVFYLANW VAQLYFVPQG VGVFFLICLL AIITSPGFSA SEGNAVSHRV VIILVLAALT VSHLLTSIVA LLCVGALTLS RLVKGFNLGI LAGMLVGCWT IYGAATQFDS QLPDFANRAF ELENLFQFSS SSGGVDAGAA FLEISRARFI FSGLFAGLAV LGVLLSLKYR NRFDFSLFAL EGVAIVILCS MLYGSEFWTR AFLFSLVPIA YFAVKLLRNR LSTLVMAAVL LVAIPGHLLA HYGAIPDMVS RFDLAAWQYL ENYTLRGYIS GGISYIKPDY LSLPLKKLDW QDGLLVSQGY TGRYPQYLQI GRSTGVGWVY YNGDSQYVPA LEAALEDSAS YGLIYQNGEM NIYFNQGAN
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