| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | DehaBAV1_0056 |
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| Symbol | |
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| ID | 5132001 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dehalococcoides sp. BAV1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009455 |
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| Strand | + |
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| Start bp | 57557 |
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| End bp | 58555 |
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| Gene Length | 999 bp |
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| Protein Length | 332 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640528960 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001213526 |
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| Protein GI | 147668708 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGACC GTTTAACTCA CAAAAATTCT TACGATTACC CAATCGTAGC TAGTGACCTT
TTGACTACAC CTGATGACCT CAGATTGTGT CTTTCCACCT ATCTTCTTAT GGCCAAAGTA
GGGCAGCTGA GCCCCGCAAC AATTTCAAAT TACAGATATA TGTGCGGCAA GTTTGTTGAT
TTTTGCCAGG AACATGGCGT TACTAAGCCG GCGCAGATTA CCTCAATACA CCTCGGTTTA
TTTCTACAAC AGTTACAGCT GACCAACGGC CCACAATCCG TTACTGATTA CTTCAAGCAA
ATTCGCCCAT TTATTAACTG GCTCAAGGAC AATGGGCAAA TTACAGTAGA TCCGTTAAAA
CAGGTACGTC TGCCTAAAGT ACCCCGCAAA GTTATTCAGC CGTTCACTCA AGAGCATTGT
CAGCGGTTGC TGGCTTTAGT GTCCGGCGAA ACATTCGAAG ATAAAAGGAA TAAAGCACTT
ATTCTGTTGT TGCTGGATAC AGGCCTCAGA CTGAGGGAAT GCACAGAGCT GAAGTGGAGT
GATATCAATT ATGATAGTGA ATTGGTTAAG GTTATGGGCA AAGGAGCTAA GGAGAGGATT
GTACGCATAG GCCCTAAAGT TCAGAGGGCA TTACTGGAAT ATCAGTATCT TAAAATCCAG
TCATTCCCCG GAGATAAAAC CCCTGATGTT TGGGTTAGCC GTCACAAGAC TCGCTATAGT
GATAAAGAGT GCCACCCTTT AACTAAAAAT GGCATCATGC AGACAATCGT CGTATTAGGA
AAGCGGGCAG GGATTACAAA TATCCGGTGC AGCCCTCATA CATTCAGGCA CACCTTCGCT
ACTATGTGCT TACGGAATGG GGCAGGGGAG TTTGAAGTTC AATCTCTTAT GGGGCATAGC
ACTCTGACGC AAACTAGAAA ATACGCTGCC AGTTTGAATT CTGAGGTAGC TGTTCAAGGG
CATAAGAAGT TTAGTCCGGT TGATAACCTG AAGCTATAA
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| Protein sequence | MNDRLTHKNS YDYPIVASDL LTTPDDLRLC LSTYLLMAKV GQLSPATISN YRYMCGKFVD
FCQEHGVTKP AQITSIHLGL FLQQLQLTNG PQSVTDYFKQ IRPFINWLKD NGQITVDPLK
QVRLPKVPRK VIQPFTQEHC QRLLALVSGE TFEDKRNKAL ILLLLDTGLR LRECTELKWS
DINYDSELVK VMGKGAKERI VRIGPKVQRA LLEYQYLKIQ SFPGDKTPDV WVSRHKTRYS
DKECHPLTKN GIMQTIVVLG KRAGITNIRC SPHTFRHTFA TMCLRNGAGE FEVQSLMGHS
TLTQTRKYAA SLNSEVAVQG HKKFSPVDNL KL
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