Gene Ddes_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2275 
Symbol 
ID7285992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2739210 
End bp2740172 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content62% 
IMG OID643583097 
Productaminotransferase class IV 
Protein accessionYP_002480848 
Protein GI220905536 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.337005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAAAGCAG TCGATGCCCA TACCTATCTT GCGGCCCTGC TGGCCGCTCC CCGGCCCGGT 
TCTGAAAACG TGCTGGCGTT CTATGATCAC AGGGTGGGGC ATATCTGCAC TGACGCGGCC
CTTCTGCTTT TGCCGCTGGA TGATCACATC TGCCACAGGG GCGACGGTCT TTTTGAGAGC
ATCAGCTACC GCCAGGGCAG GCTGTTCAGC TTTGACCAGC ACCTTGCGCG CCTCAAGGAC
GGAGCCGCGG CTCTCGGCAT CCCCCCTCCC TGTCCGTGGG ATACACTGCG CCGCATCATA
CTGGACGTGG CCCGCGCCTC GGGCAGCGAT CACGGCGACA TGCGCATATT CCTGAGCCGA
GGCCCTGGCG GCTTCGGCAT CAGCCCGGCT GAATGCCCCC AGGCAGGCCT GTATGTGGTG
GCCCTGCGCA AAAAATTTGC GGGCCAAGCC TTTTATGAAA AAGGGCTCAC CGCCTTTACC
AGTGACATCC CGCCCAAGCA GGAATACCTG GCCCGCATAA AAAACACCAA TTATCTGCCC
AATGTGTTCA TGGCTATGGA GGCCGCCCGC AAGGGCATGG ACGTTGCCGT GACCTTTGAT
GAAGACGGCT TCATGGGCGA AGCCGCCACA GCCAACGTGG GCCTTGTGGA CGAACGGGGA
CGCCTGCTCT GCCCCGAACT CAGACGCATC CTGCCCGGCA CCACCATGCT GGCCGCCCTT
GAACTGGCCG CGCGCCGCCA CCCCGGTCCC ATGACGGTAA TAGAGGCCCC CATAGCCAAA
GAACAGATCA GCACGGCCAG TGAAATGCTG CTTTTCACCA GTTCCACCCT CTGCGTGGGG
GTGACCCATT TTGACGGAAA GCCCGTGGGC TGCGGCGAGC ATCTGGGCAG GCCGGGTCCG
GTGGCCCGGT GGCTCAAGGA TGCCCTGCTG CGGCATTTGA TGGAACAAGG TACTCCCTTC
TGA
 
Protein sequence
MKAVDAHTYL AALLAAPRPG SENVLAFYDH RVGHICTDAA LLLLPLDDHI CHRGDGLFES 
ISYRQGRLFS FDQHLARLKD GAAALGIPPP CPWDTLRRII LDVARASGSD HGDMRIFLSR
GPGGFGISPA ECPQAGLYVV ALRKKFAGQA FYEKGLTAFT SDIPPKQEYL ARIKNTNYLP
NVFMAMEAAR KGMDVAVTFD EDGFMGEAAT ANVGLVDERG RLLCPELRRI LPGTTMLAAL
ELAARRHPGP MTVIEAPIAK EQISTASEML LFTSSTLCVG VTHFDGKPVG CGEHLGRPGP
VARWLKDALL RHLMEQGTPF