Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2203 |
Symbol | |
ID | 7285919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2656008 |
End bp | 2658017 |
Gene Length | 2010 bp |
Protein Length | 669 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 643583025 |
Product | ABC transporter related |
Protein accession | YP_002480777 |
Protein GI | 220905465 |
COG category | [R] General function prediction only |
COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAGATAA CGATTCAGGA ACTTTCCAAG TCATTTGGCG GCCGGGATAT TTTCAGCAAT TTTTCGCTGG AGGTGGACTC CGGCGTGCGT TTGTGCGTGT GCGGTCCCAA CGGCACGGGT AAGTCCACGC TTTTACGCCT GCTGGCCGGG GTGGATGCCC CGGACGGCGG CCGTGTCATC CTGCCGCGCG GTTGCCGCAT GGGCTATGTG GAACAGGAGC TTTCAGAAGA AGCCCTGGAC ACACCCCTGC TGACCTACGT GCTGGACGTG CTGCATGACT GGAGCGATTT TTGGGCGCAA TGGGAAGATG CCGCCGCCAG CAAGGACGAA GCCCTGCTGA CCGAGCTTAT GCACCGGCAG AGCGAGCTTG AAGCGCGCTA CGGCTATAAT CCCGAGCACC GGGCCAAGGC TGTGCTTTCA GGACTGGGCT TTGCCGAGCG CAAGTGGCAC CGCACCCTGC GCGAACTTTC GGGCGGCTGG CGCGAGCGCG CCAAGCTGGC CCGTGTGCTT ACCGCCGGGG CCGATGTACT CCTGCTGGAC GAACCCACCA ACCATCTGGA TATGGAAGCC GTGGAGTGGC TGGAGTCCTT TCTGCTGGAC TTCAAGGGCG CGCTGGTCTT TGTGGCGCAC GACCGCCGCT TTATGGACAC GGTGGGCACG CATGTGCTTT ACCTCGGCCT TTCGCGACCC GTATTCCGCA AGGCCACCTA TACCCAGTTT CTGACCCTTC AGGACGAGTA TAACGCCCAG CGCGAACGCG AAGCCCGCGC CCTCAAGGAC GAGCTTGACC GCAAAATGGC CTTTGTGGAG CGCTTCCGCG CCAAGGCCAC CAAGGCCCGT CAGGCCGGGT CGCGCCAGAA GATGGCGAAA AAGCTGGAAA AAGAGCTGGA AGACTACCGG CCGGAACCCA AGCGCAAAGA GCTGAATTTC ACCTGGCCCG AAGCACCGCA TTCTGAAAAA ATCGTGCTCT CTGCCGCAGA CCTGGACTTT CACTTCAACG ACGGCAAAAA AATGTGGCCG CCGCTGAGTT TCACCCTGTA TCGCGGCCAG CGCATCGCCC TGGTAGGACA CAACGGCTGC GGCAAGTCCA CCCTGCTCAA ACTGCTGGCA GGCAATCTTG AGCGCTGCGG CGGCAATATG GTCACCTCGT CCCAGGTGCG GCTGGGCTAC TATACCCAGC ACCAGATGGA CACCCTGCGC GGCGACACCA CAGTGCTTGG CGAAATCCGC CGCCTGTCCG ACCCCCGCAC CACAGAAGAA GAGCTTATGA GTGTGCTCGG GCTGTTCATG CTGGGGCAGG AATACTTTGA CCGTCAGGTC AGCGGCCTTT CAGGCGGCGA AAAAAGCCGT CTTGTGCTGG CAAGCCTATT CCTGAAGCGC TGCAACTTTC TGCTGCTGGA CGAACCCACC AACCATCTGG ACCTTGAAAG CCGCGAGGCG CTCGTATCGG CCCTGCAAAA ATTCACAGGC ACCCTGCTTA TGGTGGCCCA CGACCGCTGG CTGCTCTCTC AGGTGGGCGC GGAAGCATGG GAGCTTGACA AAAGCGGCCT GACTGTGTTC TCGGATTTTA CCGCATATGA TGCCGAACGC CGCTCGCGCA TGGCAGGTAC GGGGCAAACG GCCCCGGCCG TTTCCGGCGG CGTTGCCTCC GGCCGGAACG CTTCGGGTGA TCAGGCGCAG GAGGCTTCGG CACAAAATCT TTCGCGCGAA GAGCAAAAAC GCCTCAAACG CGAACAGGCC GAAAAGCGCA ACGCCCTGCA CAAGGAAATC AAGCCCCTGC AAAGCAAGTA TGACGCCCTG GAAAAAGAAC TTACCGGGGT GCTTGAAAAA CAGGGCACGG TGGAGGCCCA GCTGGCCGAC CCCGAAGTCT ACGCCGAGCA CGAAAAGGCT GCGGAACTGC TGAAGAGTTT TGAAGCCTGC AAAAAACGCG GCGAAGACAT CTTTGAGGAA ATGACCGCTC TTGACGAGCG CATGGAAGCC GTGCGCGCAC GGTGGAATAC AGAAGACTGA
|
Protein sequence | MKITIQELSK SFGGRDIFSN FSLEVDSGVR LCVCGPNGTG KSTLLRLLAG VDAPDGGRVI LPRGCRMGYV EQELSEEALD TPLLTYVLDV LHDWSDFWAQ WEDAAASKDE ALLTELMHRQ SELEARYGYN PEHRAKAVLS GLGFAERKWH RTLRELSGGW RERAKLARVL TAGADVLLLD EPTNHLDMEA VEWLESFLLD FKGALVFVAH DRRFMDTVGT HVLYLGLSRP VFRKATYTQF LTLQDEYNAQ REREARALKD ELDRKMAFVE RFRAKATKAR QAGSRQKMAK KLEKELEDYR PEPKRKELNF TWPEAPHSEK IVLSAADLDF HFNDGKKMWP PLSFTLYRGQ RIALVGHNGC GKSTLLKLLA GNLERCGGNM VTSSQVRLGY YTQHQMDTLR GDTTVLGEIR RLSDPRTTEE ELMSVLGLFM LGQEYFDRQV SGLSGGEKSR LVLASLFLKR CNFLLLDEPT NHLDLESREA LVSALQKFTG TLLMVAHDRW LLSQVGAEAW ELDKSGLTVF SDFTAYDAER RSRMAGTGQT APAVSGGVAS GRNASGDQAQ EASAQNLSRE EQKRLKREQA EKRNALHKEI KPLQSKYDAL EKELTGVLEK QGTVEAQLAD PEVYAEHEKA AELLKSFEAC KKRGEDIFEE MTALDERMEA VRARWNTED
|
| |