Gene Ddes_2143 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_2143 
Symbol 
ID7285859 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2583877 
End bp2584797 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content57% 
IMG OID643582965 
Productbranched-chain amino acid aminotransferase 
Protein accessionYP_002480717 
Protein GI220905405 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase 
TIGRFAM ID[TIGR01122] branched-chain amino acid aminotransferase, group I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAAAGA TGAAGTACAT CTGGGTTGAC GGAAAAATGG TTCCCTGGGA CGAAGCCCAG 
GTTCACGTGC TCACCCATGC CCTGCATTAC GGCAGCGCCA TTTTCGAGGG CATCCGGGCT 
TATGCCTGTG CCGACGGCAC GTCCGCCATA TTCCGCCTTG AAGACCACTG CAAGCGTATG 
CTCAACTCCG CCAAGATCCT ACGCATGAAC CTCACTCTTA CCGTAGAAGA GCTGGTAAAA 
GCCTGCGTGG AAACGCTTGA AATCAACAAA CTGGCCGAAG GCTATGTGCG TCCGCTTTCT 
TTCGTGGGCT ATGGCGAAAT GGGCGTCTAC CCCGGCAACA ATCCGGTGCA GACCATTGTA 
GCCACCTGGC CCTGGGGGGC CTATCTTGGC GCCGAAGCTC TGGAAAAGGG CATTCGCGTC 
AAAACCAGCA CCTTTGCCCG CAGCCATGTG AACACCAGCA TGTCCAAGGC CAAGGCCGCA 
GGCAACTACA TCAACTCCAT CCTTGCCAAG GTGGAAGCCA AGGACGAAGG CTATGACGAG 
GCCGTCATGC TGGACACCAG CGGCTATGTG TCTGAAGCCA CTGGTGAAAA TATCTTTATC 
GTACGCGACG GCATCATCAA GACCACGCCC TGGACCTCCA TCCTCGGCGG CATCACCCGT 
GACTCCGTCA TGAAGCTGGC CCAGGACCTG GGCTACACGG TGGAAGAACA GCAGTTCACC 
CGTGACGAAA TGTATATTGC CGACGAGGCG TTCTTTACCG GCACCGCGGC GGAAATAACC 
CCCATCCGCG AGATGGACCA CCGCCAGATC GGCGCCGGAC ACGCCGGGCC TGTGACCAAG 
CACCTGCAAA CCGAGTACTT CAAGATCGTC AAGGGCCAGA ACCCCAAGTA CGCCGGCTGG 
CTGCACCACT ATAAAGTCTA G
 
Protein sequence
MQKMKYIWVD GKMVPWDEAQ VHVLTHALHY GSAIFEGIRA YACADGTSAI FRLEDHCKRM 
LNSAKILRMN LTLTVEELVK ACVETLEINK LAEGYVRPLS FVGYGEMGVY PGNNPVQTIV 
ATWPWGAYLG AEALEKGIRV KTSTFARSHV NTSMSKAKAA GNYINSILAK VEAKDEGYDE 
AVMLDTSGYV SEATGENIFI VRDGIIKTTP WTSILGGITR DSVMKLAQDL GYTVEEQQFT 
RDEMYIADEA FFTGTAAEIT PIREMDHRQI GAGHAGPVTK HLQTEYFKIV KGQNPKYAGW 
LHHYKV