Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ddes_2096 |
Symbol | |
ID | 7285812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 |
Kingdom | Bacteria |
Replicon accession | NC_011883 |
Strand | + |
Start bp | 2525904 |
End bp | 2526830 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643582918 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_002480670 |
Protein GI | 220905358 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATGCCG TAACAGCAGA AGCCAGCATT CCCGCAGCCA CGCACGCTCC CGCCCCGGGC ATCGGTCGGG ACGGGGCAGA CGCGCTCCTG TACGGTGTTG TGGGCTGGCC GCTGACGCAG AGCCTTTCTC CCCTGCTGCA CAATACCGGC TTCAAGACTC TCGGCCTGCC CGGTCTTTAT CTGCGGTGGG AAGTACCGCC GCAGCGGCTG GCCGCATTTG TGGACAGCGT GCGCCTGCTC AACATCCGCG GCTGCTCCGT TACCATTCCG CACAAAGTTG CCCTGCTGCC CCTGCTGGAT GAGGTCAGCC CTCTGGCCCG GCGTGTGGGC GCGGTCAACA CCATCTACTG GCGTGGCGGT CTGCTTTACG GCGACAATAC TGATGTCGCG GGGTTTATGG CCCCGCTGGC GCAGGAAGCG CTTGGCGGCG CGAATGTGCT TGTTCTGGGC GCAGGCGGCG CGGCCCGGGC CGTGGCGGCC GGTCTGACTG CCCTTGAGCC GGGCAGCAGG CCCGAAAATA TTTATGTGGC TACACCCTCC GACCGTTCGC ACCTGCCCCT GGCCGAAGAA TTCGGCCTGA AGCCGCTGAA CTGGAGCCGC CGCCACGATG TGCCGGCGCT TCTGGTCGTC AATACCACTC CCCTGGGCAT GCGGGGCAAG GCCGAAGGCG AAAGCCCCTA TTCATTTGAG ACCACAGGTA AAAACCTGGG GCCACATGCT GCCGGGGCAA CGGCCATTGC CTATGATATT GTATATAACC CGTTGAAAAC ACGCTTCTTG CAGGAGGCCG CCCGGGCGGG CAGGCGCTGC CTGACGGGGC TGGACATGTT TTTCGGTCAG GGAGATGCCC AGTTCCGCCT GTGGACGGGC CAGCCCCTGC CCCTGAACGC GCGGCACGCG CTGGAGACCG CGCTGGCCGC AAGCTAG
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Protein sequence | MNAVTAEASI PAATHAPAPG IGRDGADALL YGVVGWPLTQ SLSPLLHNTG FKTLGLPGLY LRWEVPPQRL AAFVDSVRLL NIRGCSVTIP HKVALLPLLD EVSPLARRVG AVNTIYWRGG LLYGDNTDVA GFMAPLAQEA LGGANVLVLG AGGAARAVAA GLTALEPGSR PENIYVATPS DRSHLPLAEE FGLKPLNWSR RHDVPALLVV NTTPLGMRGK AEGESPYSFE TTGKNLGPHA AGATAIAYDI VYNPLKTRFL QEAARAGRRC LTGLDMFFGQ GDAQFRLWTG QPLPLNARHA LETALAAS
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