Gene Ddes_1916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1916 
Symbol 
ID7285631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp2308633 
End bp2309292 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content59% 
IMG OID643582737 
ProductCBS domain containing membrane protein 
Protein accessionYP_002480490 
Protein GI220905178 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.683041 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCGTAC AAAACTGGAT GACCACCGAT GTTGTGAGCG TCACCCCGGA GACGTCTCTG 
CTAAAGGTGG GCAAGCTCAT GAAGGACCAC CATGTCCGCC GCCTGCCCGT GCTTGATGAC 
AAGGGCCGTG TGGTCGGCAT CATTTCTGAC CGTGACGTGC GTGACGCCTC CCCCTCCAAG 
GCCACCACGC TCGACATGTA CGAAATGCAC TATCTGCTCG CCGAGCTCAA GGCCAAAAAC 
ATTATGACGG CCAACCCCAT GACCGTCAAA CCTTCCGACA CGGTAGAGCA GGCGGCCCTG 
ATCATGCTCG ACAACAAGAT CGGCGGGTTG CCCGTGGTGG AAGACAGCGG CAAGCTGGTG 
GGCATTATTT CAGACCACGA TGTTTTCAAG GCCCTGGTCG ACATCACCGG CGCGCGCCTT 
GGCGGCCTCC AGTTCGCCAT AGAGCTGCCC GACCTGCCCG GCACGGCCCG CCCCCTCTTT 
GACCTGCTGC GCGCCCACAA CGCGCGCCTG CTGTCTGTTT TGACCGTAAG TAACGAAGAT 
GGCAATCGTC ACATATTTAT CCGGGTGCGT GATCTTAAAA ACGCCGCGGC CGAAAATACC 
CTGATGGAAG AGGTTGCAAA GCTCGGCCGG GTGCTGTATT GCATTCGGCA AAATGCCTGA
 
Protein sequence
MPVQNWMTTD VVSVTPETSL LKVGKLMKDH HVRRLPVLDD KGRVVGIISD RDVRDASPSK 
ATTLDMYEMH YLLAELKAKN IMTANPMTVK PSDTVEQAAL IMLDNKIGGL PVVEDSGKLV 
GIISDHDVFK ALVDITGARL GGLQFAIELP DLPGTARPLF DLLRAHNARL LSVLTVSNED 
GNRHIFIRVR DLKNAAAENT LMEEVAKLGR VLYCIRQNA