Gene Ddes_1800 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1800 
Symbol 
ID7285513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand
Start bp2174868 
End bp2175809 
Gene Length942 bp 
Protein Length313 aa 
Translation table11 
GC content61% 
IMG OID643582620 
Productformamidopyrimidine-DNA glycosylase 
Protein accessionYP_002480375 
Protein GI220905063 
COG category[L] Replication, recombination and repair 
COG ID[COG0266] Formamidopyrimidine-DNA glycosylase 
TIGRFAM ID[TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGAGC TGCCGGAAGT GGAGACTGTT GCCCGCACCC TGCGGCCCCA TGTGCAGGGT 
CGCATTATTG CTGACGCGCA GGTTTTGCGC CCCACCAGCC AGCATCCCCT GAGCCTGCCC
CTGCAGGACC TGCGGGGATG CCGCATCGCT GACGTAGTGC GCCGGGGCAA ACTGCTCTTG
CTGCTGCTTG ACCCAACCGA AGCGGAAAAA ACGTGTGTAC GCGGCATGCA AAACCTGTGT
CTGGCCGTGC ACTTGCGCAT GACGGGGCGC CTTATGACCT ATGCGGCGAA AACGTCGCCA
GGCACGCATA CCCGCTGTAT CCTTGATCTG AAAGCATTGC CCGCCACGGC TGGCGGGCAG
GCCGCGGCGG AATGTGGGCC TGCCGGAGGA GCAGGCGTGC CCGGGGCTGA AGACTGTTTG
ACGTCCGGCG AGCGTCGCCT GTTTTTTGAC GACGTGCGCG CCTTCGGAAC CATGCTGGCA
GGCACGCCGG AGATGTTTGC CCGCTGGCCT TTCTGGCGGG AGCTTGGCCC CGAGCCTCTG
GATATTACGG AAGCGGCCTT TGCCGCAAGC ATTGCCGCAA AAAGGTCTGC CATCAAGGCT
GTGCTGCTGG ATCAGAAAAT GCTGGCCGGG GTAGGCAATA TCTATGCGGA CGAAAGCCTG
TTTGCCGCAG GCATTGACCC GCGCCGGAAA GGTTCTGAGC TGACGCGGCT TCAGGCCGAC
CGCCTTTTGC AATGCCTGCG GGATGTGCTT TTACTGTCCA TCTCCCAGTG CGGCAGTTCC
ATTCGTGATT ACAGGGATGC CGACGGCAAT GTGGGGGCCT TTCAGAATAC CTTTGCCGTG
TACGGGCGCG GCGGGCAAAA GTGCAAGACT TGCGGAAGCC TTCTGGAAAA GGCCAAAGTG
GCTGGCAGGA GTACAGTTTT TTGCCCGCAG TGTCAGCATT AG
 
Protein sequence
MPELPEVETV ARTLRPHVQG RIIADAQVLR PTSQHPLSLP LQDLRGCRIA DVVRRGKLLL 
LLLDPTEAEK TCVRGMQNLC LAVHLRMTGR LMTYAAKTSP GTHTRCILDL KALPATAGGQ
AAAECGPAGG AGVPGAEDCL TSGERRLFFD DVRAFGTMLA GTPEMFARWP FWRELGPEPL
DITEAAFAAS IAAKRSAIKA VLLDQKMLAG VGNIYADESL FAAGIDPRRK GSELTRLQAD
RLLQCLRDVL LLSISQCGSS IRDYRDADGN VGAFQNTFAV YGRGGQKCKT CGSLLEKAKV
AGRSTVFCPQ CQH