Gene Ddes_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDdes_1540 
Symbol 
ID7285238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio desulfuricans subsp. desulfuricans str. ATCC 27774 
KingdomBacteria 
Replicon accessionNC_011883 
Strand+ 
Start bp1842222 
End bp1843268 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content54% 
IMG OID643582351 
ProductABC transporter related 
Protein accessionYP_002480120 
Protein GI220904808 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.00159208 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCGGCAAA TAACGCATCC TTCCCGGATT ATATTAACAG ACTCAGGTAC CAAGCGCATG 
ATTCAGGTAA ACCAGCTTCG CAAGAGTTTC GGCAGCCATG TTGTTTTGCA GGACATCAAC 
ATGCATGTGC GCCGTGGCGA AATTTTCGGT ATTGTCGGGC ATTCCGGGGC AGGAAAGTCC 
ACGCTTCTGC GTTGTCTCAA CGGCCTTGAG CCTTACGATA GCGGCAATGT CAGGGTTATG 
GATGTTGAGG TCGCCTCGCT CGACTCCCAC CACCTGCGCC AACTGCAAAG CAAGATGGGC 
ATGATTTTTC AGAATTTCAA CCTGATGGCC CGCAAAAACG TTTTTGATAA CGTGGCCTTT 
CCCTTGCATC TCTGGCACAG ACCTGAGCGC GAAAAGCGCG TTATGGAGTT GCTCGAGCTT 
GTGGGCCTTA CGGACAAGGC CCGCCAGAGG GTACAGAGCC TGAGCGGCGG CCAGAAACAG 
CGTGTGGGCA TTGCCCGCGC CCTGGCCCTG AATCCCAGCA TTCTGCTTTG CGACGAGGCC 
ACGTCCGCCC TTGATCCCAA AACCACATCT TCCATCCTTG ACCTGCTGGA AGACATCAAC 
AAGCGGCTGA ACCTGACCAT TATCATGGTC ACGCATCAGA TGGAGGTGGT CAAACGCCTC 
TGCCACAGCC TGCTTTTGCT TGATGGCGGC AAAACCGTGG CATTGGGCAA GACAGAAGAC 
CTGTTTCTTG CGCCCACCAA GGATATGCAG GCCATTGTGG AAAACGAGTA TACGCTTATC 
CCCGGTGGAA CCAATATACG CCTCATGTTC CCGCGCGAAA TTTCGCAGCA GAGCGTCATC 
ACGCAGATGG CCAGAGCGCT GGGCATAGAT TTTTCCATTG TGGGCGGCAA GCTGGAACGC 
TATCTGGACG ATGTTTTCGG CTTTCTTATT ATCAACGTGC AGGACCAGAA TATTGACGCC 
GTGCTGCGCT ACCTGAAGGA GCAGCGCCTG TACTGGGAGA TACTGGAATA TCCTTTGCAA 
CAAGCTACGG ATGCCGCCAA TGAGTGA
 
Protein sequence
MRQITHPSRI ILTDSGTKRM IQVNQLRKSF GSHVVLQDIN MHVRRGEIFG IVGHSGAGKS 
TLLRCLNGLE PYDSGNVRVM DVEVASLDSH HLRQLQSKMG MIFQNFNLMA RKNVFDNVAF 
PLHLWHRPER EKRVMELLEL VGLTDKARQR VQSLSGGQKQ RVGIARALAL NPSILLCDEA 
TSALDPKTTS SILDLLEDIN KRLNLTIIMV THQMEVVKRL CHSLLLLDGG KTVALGKTED 
LFLAPTKDMQ AIVENEYTLI PGGTNIRLMF PREISQQSVI TQMARALGID FSIVGGKLER 
YLDDVFGFLI INVQDQNIDA VLRYLKEQRL YWEILEYPLQ QATDAANE